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Home › Dataset Library › Gene expression in retina and LGN of wild type and Chrnb2-/- mice

Dataset: Gene expression in retina and LGN of wild type and Chrnb2-/- mice

Mice lacking the beta 2 subunit (Chrnb2) of the neuronal nicotinic acetylcholine receptor display altered retinal waves and disorganized...

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Mice lacking the beta 2 subunit (Chrnb2) of the neuronal nicotinic acetylcholine receptor display altered retinal waves and disorganized projections of the retinal ganglion cells to the lateral geniculate nucleus (LGN). mRNA populations from retinas and LGN from Chrnb2-/-and wild type (C57BL/6J) mice were compared at 4 days postnatal, when RGC segregation to the LGN begins in WT mice. Retinal mRNAs were also compared at adulthood. Using microarray hybridization, we identified transcripts which are differentially expressed between Chrnb2-/- and wild type animals in these two tissues at these two ages. mRNA was isolated from retina and LGN of three male littermates each of WT and Chrnb2-/- mice at P4. mRNA from retinas of two adult male littermates of each type was also examined.

Species:
mouse

Samples:
24

Source:
E-GEOD-22824

Updated:
Dec.12, 2014

Registered:
Nov.11, 2014


Factors: (via ArrayExpress)
Sample GENOTYPE/VARIATION TISSUE MOUSE DEVELOPMENTAL STAGE MUTANT ALLELE
GSM564240 Chrnb2-/- (verified by PCR from tail snip, parents are Picciotto mutant) left and right total retinas Postnatal day 4 (before retinal ganglion cell segregation in lateral geniculate nucleus) Picciotto
GSM564240 Chrnb2-/- (verified by PCR from tail snip, parents are Picciotto mutant) left and right total retinas Postnatal day 4 (before retinal ganglion cell segregation in lateral geniculate nucleus) Picciotto
GSM564240 Chrnb2-/- (verified by PCR from tail snip, parents are Picciotto mutant) left and right total retinas Postnatal day 4 (before retinal ganglion cell segregation in lateral geniculate nucleus) Picciotto
GSM564243 Chrnb2-/- (verified by PCR from tail snip, parents are Xu mutant) left and right total retinas Postnatal day 4 (before retinal ganglion cell segregation in lateral geniculate nucleus) Xu
GSM564243 Chrnb2-/- (verified by PCR from tail snip, parents are Xu mutant) left and right total retinas Postnatal day 4 (before retinal ganglion cell segregation in lateral geniculate nucleus) Xu
GSM564243 Chrnb2-/- (verified by PCR from tail snip, parents are Xu mutant) left and right total retinas Postnatal day 4 (before retinal ganglion cell segregation in lateral geniculate nucleus) Xu
GSM564246 wild type left and right total retinas Postnatal day 4 (before retinal ganglion cell segregation in lateral geniculate nucleus) not specified
GSM564246 wild type left and right total retinas Postnatal day 4 (before retinal ganglion cell segregation in lateral geniculate nucleus) not specified
GSM564246 wild type left and right total retinas Postnatal day 4 (before retinal ganglion cell segregation in lateral geniculate nucleus) not specified
GSM564249 Chrnb2-/- (verified by PCR from tail snip, parents are Picciotto mutant) left and right total lateral geniculate nucleus (LGN) Postnatal day 4 (before retinal ganglion cell segregation in lateral geniculate nucleus) Picciotto
GSM564249 Chrnb2-/- (verified by PCR from tail snip, parents are Picciotto mutant) left and right total lateral geniculate nucleus (LGN) Postnatal day 4 (before retinal ganglion cell segregation in lateral geniculate nucleus) Picciotto
GSM564249 Chrnb2-/- (verified by PCR from tail snip, parents are Picciotto mutant) left and right total lateral geniculate nucleus (LGN) Postnatal day 4 (before retinal ganglion cell segregation in lateral geniculate nucleus) Picciotto
GSM564252 Chrnb2-/- (verified by PCR from tail snip, parents are Xu mutant) left and right total lateral geniculate nucleus (LGN) Postnatal day 4 (before retinal ganglion cell segregation in lateral geniculate nucleus) Xu
GSM564252 Chrnb2-/- (verified by PCR from tail snip, parents are Xu mutant) left and right total lateral geniculate nucleus (LGN) Postnatal day 4 (before retinal ganglion cell segregation in lateral geniculate nucleus) Xu
GSM564252 Chrnb2-/- (verified by PCR from tail snip, parents are Xu mutant) left and right total lateral geniculate nucleus (LGN) Postnatal day 4 (before retinal ganglion cell segregation in lateral geniculate nucleus) Xu
GSM564255 wild type left and right total lateral geniculate nucleus (LGN) Postnatal day 4 (before retinal ganglion cell segregation in lateral geniculate nucleus) not specified
GSM564255 wild type left and right total lateral geniculate nucleus (LGN) Postnatal day 4 (before retinal ganglion cell segregation in lateral geniculate nucleus) not specified
GSM564255 wild type left and right total lateral geniculate nucleus (LGN) Postnatal day 4 (before retinal ganglion cell segregation in lateral geniculate nucleus) not specified
GSM564258 Chrnb2-/- (verified by PCR from tail snip, parents are Picciotto mutant) left and right total retinas 1542 Adult (after retinal ganglion cell segregation in lateral geniculate nucleus is complete) Picciotto
GSM564259 Chrnb2-/- (verified by PCR from tail snip, parents are Picciotto mutant) left and right total retinas 1543 Adult (after retinal ganglion cell segregation in lateral geniculate nucleus is complete) Picciotto
GSM564260 Chrnb2-/- (verified by PCR from tail snip, parents are Xu mutant) left and right total retinas 77 Adult (after retinal ganglion cell segregation in lateral geniculate nucleus is complete) Xu
GSM56426 Chrnb2-/- (verified by PCR from tail snip, parents are Xu mutant) left and right total retinas 78 Adult (after retinal ganglion cell segregation in lateral geniculate nucleus is complete) Xu
GSM564262 wild type left and right total retinas 748 Adult (after retinal ganglion cell segregation in lateral geniculate nucleus is complete) not specified
GSM564263 wild type left and right total retinas 763 Adult (after retinal ganglion cell segregation in lateral geniculate nucleus is complete) not specified

Tags

  • acetylcholine
  • acetylcholine receptor
  • ganglion
  • lateral
  • nicotinic acetylcholine receptor
  • retina

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