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Home › Dataset Library › Gene expression in retina and LGN of wild type and Chrnb2-/- mice

Dataset: Gene expression in retina and LGN of wild type and Chrnb2-/- mice

Mice lacking the beta 2 subunit (Chrnb2) of the neuronal nicotinic acetylcholine receptor display altered retinal waves and disorganized...

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Mice lacking the beta 2 subunit (Chrnb2) of the neuronal nicotinic acetylcholine receptor display altered retinal waves and disorganized projections of the retinal ganglion cells to the lateral geniculate nucleus (LGN). mRNA populations from retinas and LGN from Chrnb2-/-and wild type (C57BL/6J) mice were compared at 4 days postnatal, when RGC segregation to the LGN begins in WT mice. Retinal mRNAs were also compared at adulthood. Using microarray hybridization, we identified transcripts which are differentially expressed between Chrnb2-/- and wild type animals in these two tissues at these two ages. mRNA was isolated from retina and LGN of three male littermates each of WT and Chrnb2-/- mice at P4. mRNA from retinas of two adult male littermates of each type was also examined.

Species:
mouse

Samples:
24

Source:
E-GEOD-22824

Updated:
Dec.12, 2014

Registered:
Nov.11, 2014


Factors: (via ArrayExpress)
Sample MOUSE TISSUE MUTANT ALLELE GENOTYPE/VARIATION DEVELOPMENTAL STAGE
GSM564240 left and right total retinas Picciotto Chrnb2-/- (verified by PCR from tail snip, parents are Picciotto mutant) Postnatal day 4 (before retinal ganglion cell segregation in lateral geniculate nucleus)
GSM564240 left and right total retinas Picciotto Chrnb2-/- (verified by PCR from tail snip, parents are Picciotto mutant) Postnatal day 4 (before retinal ganglion cell segregation in lateral geniculate nucleus)
GSM564240 left and right total retinas Picciotto Chrnb2-/- (verified by PCR from tail snip, parents are Picciotto mutant) Postnatal day 4 (before retinal ganglion cell segregation in lateral geniculate nucleus)
GSM564243 left and right total retinas Xu Chrnb2-/- (verified by PCR from tail snip, parents are Xu mutant) Postnatal day 4 (before retinal ganglion cell segregation in lateral geniculate nucleus)
GSM564243 left and right total retinas Xu Chrnb2-/- (verified by PCR from tail snip, parents are Xu mutant) Postnatal day 4 (before retinal ganglion cell segregation in lateral geniculate nucleus)
GSM564243 left and right total retinas Xu Chrnb2-/- (verified by PCR from tail snip, parents are Xu mutant) Postnatal day 4 (before retinal ganglion cell segregation in lateral geniculate nucleus)
GSM564246 left and right total retinas not specified wild type Postnatal day 4 (before retinal ganglion cell segregation in lateral geniculate nucleus)
GSM564246 left and right total retinas not specified wild type Postnatal day 4 (before retinal ganglion cell segregation in lateral geniculate nucleus)
GSM564246 left and right total retinas not specified wild type Postnatal day 4 (before retinal ganglion cell segregation in lateral geniculate nucleus)
GSM564249 left and right total lateral geniculate nucleus (LGN) Picciotto Chrnb2-/- (verified by PCR from tail snip, parents are Picciotto mutant) Postnatal day 4 (before retinal ganglion cell segregation in lateral geniculate nucleus)
GSM564249 left and right total lateral geniculate nucleus (LGN) Picciotto Chrnb2-/- (verified by PCR from tail snip, parents are Picciotto mutant) Postnatal day 4 (before retinal ganglion cell segregation in lateral geniculate nucleus)
GSM564249 left and right total lateral geniculate nucleus (LGN) Picciotto Chrnb2-/- (verified by PCR from tail snip, parents are Picciotto mutant) Postnatal day 4 (before retinal ganglion cell segregation in lateral geniculate nucleus)
GSM564252 left and right total lateral geniculate nucleus (LGN) Xu Chrnb2-/- (verified by PCR from tail snip, parents are Xu mutant) Postnatal day 4 (before retinal ganglion cell segregation in lateral geniculate nucleus)
GSM564252 left and right total lateral geniculate nucleus (LGN) Xu Chrnb2-/- (verified by PCR from tail snip, parents are Xu mutant) Postnatal day 4 (before retinal ganglion cell segregation in lateral geniculate nucleus)
GSM564252 left and right total lateral geniculate nucleus (LGN) Xu Chrnb2-/- (verified by PCR from tail snip, parents are Xu mutant) Postnatal day 4 (before retinal ganglion cell segregation in lateral geniculate nucleus)
GSM564255 left and right total lateral geniculate nucleus (LGN) not specified wild type Postnatal day 4 (before retinal ganglion cell segregation in lateral geniculate nucleus)
GSM564255 left and right total lateral geniculate nucleus (LGN) not specified wild type Postnatal day 4 (before retinal ganglion cell segregation in lateral geniculate nucleus)
GSM564255 left and right total lateral geniculate nucleus (LGN) not specified wild type Postnatal day 4 (before retinal ganglion cell segregation in lateral geniculate nucleus)
GSM564258 1542 left and right total retinas Picciotto Chrnb2-/- (verified by PCR from tail snip, parents are Picciotto mutant) Adult (after retinal ganglion cell segregation in lateral geniculate nucleus is complete)
GSM564259 1543 left and right total retinas Picciotto Chrnb2-/- (verified by PCR from tail snip, parents are Picciotto mutant) Adult (after retinal ganglion cell segregation in lateral geniculate nucleus is complete)
GSM564260 77 left and right total retinas Xu Chrnb2-/- (verified by PCR from tail snip, parents are Xu mutant) Adult (after retinal ganglion cell segregation in lateral geniculate nucleus is complete)
GSM56426 78 left and right total retinas Xu Chrnb2-/- (verified by PCR from tail snip, parents are Xu mutant) Adult (after retinal ganglion cell segregation in lateral geniculate nucleus is complete)
GSM564262 748 left and right total retinas not specified wild type Adult (after retinal ganglion cell segregation in lateral geniculate nucleus is complete)
GSM564263 763 left and right total retinas not specified wild type Adult (after retinal ganglion cell segregation in lateral geniculate nucleus is complete)

Tags

  • acetylcholine
  • acetylcholine receptor
  • ganglion
  • lateral
  • nicotinic acetylcholine receptor
  • retina

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