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Home › Dataset Library › Gene expression in retina and LGN of wild type and Chrnb2-/- mice

Dataset: Gene expression in retina and LGN of wild type and Chrnb2-/- mice

Mice lacking the beta 2 subunit (Chrnb2) of the neuronal nicotinic acetylcholine receptor display altered retinal waves and disorganized...

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Mice lacking the beta 2 subunit (Chrnb2) of the neuronal nicotinic acetylcholine receptor display altered retinal waves and disorganized projections of the retinal ganglion cells to the lateral geniculate nucleus (LGN). mRNA populations from retinas and LGN from Chrnb2-/-and wild type (C57BL/6J) mice were compared at 4 days postnatal, when RGC segregation to the LGN begins in WT mice. Retinal mRNAs were also compared at adulthood. Using microarray hybridization, we identified transcripts which are differentially expressed between Chrnb2-/- and wild type animals in these two tissues at these two ages. mRNA was isolated from retina and LGN of three male littermates each of WT and Chrnb2-/- mice at P4. mRNA from retinas of two adult male littermates of each type was also examined.

Species:
mouse

Samples:
24

Source:
E-GEOD-22824

Updated:
Dec.12, 2014

Registered:
Nov.11, 2014


Factors: (via ArrayExpress)
Sample DEVELOPMENTAL STAGE TISSUE MOUSE MUTANT ALLELE GENOTYPE/VARIATION
GSM564240 Postnatal day 4 (before retinal ganglion cell segregation in lateral geniculate nucleus) left and right total retinas Picciotto Chrnb2-/- (verified by PCR from tail snip, parents are Picciotto mutant)
GSM564240 Postnatal day 4 (before retinal ganglion cell segregation in lateral geniculate nucleus) left and right total retinas Picciotto Chrnb2-/- (verified by PCR from tail snip, parents are Picciotto mutant)
GSM564240 Postnatal day 4 (before retinal ganglion cell segregation in lateral geniculate nucleus) left and right total retinas Picciotto Chrnb2-/- (verified by PCR from tail snip, parents are Picciotto mutant)
GSM564243 Postnatal day 4 (before retinal ganglion cell segregation in lateral geniculate nucleus) left and right total retinas Xu Chrnb2-/- (verified by PCR from tail snip, parents are Xu mutant)
GSM564243 Postnatal day 4 (before retinal ganglion cell segregation in lateral geniculate nucleus) left and right total retinas Xu Chrnb2-/- (verified by PCR from tail snip, parents are Xu mutant)
GSM564243 Postnatal day 4 (before retinal ganglion cell segregation in lateral geniculate nucleus) left and right total retinas Xu Chrnb2-/- (verified by PCR from tail snip, parents are Xu mutant)
GSM564246 Postnatal day 4 (before retinal ganglion cell segregation in lateral geniculate nucleus) left and right total retinas not specified wild type
GSM564246 Postnatal day 4 (before retinal ganglion cell segregation in lateral geniculate nucleus) left and right total retinas not specified wild type
GSM564246 Postnatal day 4 (before retinal ganglion cell segregation in lateral geniculate nucleus) left and right total retinas not specified wild type
GSM564249 Postnatal day 4 (before retinal ganglion cell segregation in lateral geniculate nucleus) left and right total lateral geniculate nucleus (LGN) Picciotto Chrnb2-/- (verified by PCR from tail snip, parents are Picciotto mutant)
GSM564249 Postnatal day 4 (before retinal ganglion cell segregation in lateral geniculate nucleus) left and right total lateral geniculate nucleus (LGN) Picciotto Chrnb2-/- (verified by PCR from tail snip, parents are Picciotto mutant)
GSM564249 Postnatal day 4 (before retinal ganglion cell segregation in lateral geniculate nucleus) left and right total lateral geniculate nucleus (LGN) Picciotto Chrnb2-/- (verified by PCR from tail snip, parents are Picciotto mutant)
GSM564252 Postnatal day 4 (before retinal ganglion cell segregation in lateral geniculate nucleus) left and right total lateral geniculate nucleus (LGN) Xu Chrnb2-/- (verified by PCR from tail snip, parents are Xu mutant)
GSM564252 Postnatal day 4 (before retinal ganglion cell segregation in lateral geniculate nucleus) left and right total lateral geniculate nucleus (LGN) Xu Chrnb2-/- (verified by PCR from tail snip, parents are Xu mutant)
GSM564252 Postnatal day 4 (before retinal ganglion cell segregation in lateral geniculate nucleus) left and right total lateral geniculate nucleus (LGN) Xu Chrnb2-/- (verified by PCR from tail snip, parents are Xu mutant)
GSM564255 Postnatal day 4 (before retinal ganglion cell segregation in lateral geniculate nucleus) left and right total lateral geniculate nucleus (LGN) not specified wild type
GSM564255 Postnatal day 4 (before retinal ganglion cell segregation in lateral geniculate nucleus) left and right total lateral geniculate nucleus (LGN) not specified wild type
GSM564255 Postnatal day 4 (before retinal ganglion cell segregation in lateral geniculate nucleus) left and right total lateral geniculate nucleus (LGN) not specified wild type
GSM564258 Adult (after retinal ganglion cell segregation in lateral geniculate nucleus is complete) left and right total retinas 1542 Picciotto Chrnb2-/- (verified by PCR from tail snip, parents are Picciotto mutant)
GSM564259 Adult (after retinal ganglion cell segregation in lateral geniculate nucleus is complete) left and right total retinas 1543 Picciotto Chrnb2-/- (verified by PCR from tail snip, parents are Picciotto mutant)
GSM564260 Adult (after retinal ganglion cell segregation in lateral geniculate nucleus is complete) left and right total retinas 77 Xu Chrnb2-/- (verified by PCR from tail snip, parents are Xu mutant)
GSM56426 Adult (after retinal ganglion cell segregation in lateral geniculate nucleus is complete) left and right total retinas 78 Xu Chrnb2-/- (verified by PCR from tail snip, parents are Xu mutant)
GSM564262 Adult (after retinal ganglion cell segregation in lateral geniculate nucleus is complete) left and right total retinas 748 not specified wild type
GSM564263 Adult (after retinal ganglion cell segregation in lateral geniculate nucleus is complete) left and right total retinas 763 not specified wild type

Tags

  • acetylcholine
  • acetylcholine receptor
  • ganglion
  • lateral
  • nicotinic acetylcholine receptor
  • retina

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