Dataset: Transcription profiling by array of human HT29 colorectal adenocarcinoma cells after treatment with apratoxin A

Total RNA was extracted from apratoxin A or vehicle treated HT29 cells using the RNeasy Mini Kit (Qiagen). Probe values from CEL files...

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Total RNA was extracted from apratoxin A or vehicle treated HT29 cells using the RNeasy Mini Kit (Qiagen). Probe values from CEL files were condensed to probe sets using Rosetta Resolver software. Resolver ANOVA analysis was then performed between groups. Experiment Overall Design: 2 doses were compared to vehicle at 3 time points. Each time point had its own vehicle control

Species:: human
Samples:: 27
Source:: E-GEOD-2742
PubMed:: 16474387
Updated:: Dec.12, 2014
Registered:: Jun.19, 2014

Factors: (via ArrayExpress)

Sample	dose	compound	irradiate	temperature	time
GSE2742GSM92821		none		42	12
GSE2742GSM60137	0.01	apratoxin A		37	6
GSE2742GSM92819	100	hydrogen peroxide		37	12
GSE2742GSM60134		none		37	6
GSE2742GSM60139		none		37	12
GSE2742GSM60134		none		37	6
GSE2742GSM92819	100	hydrogen peroxide		37	12
GSE2742GSM60132	0.01	apratoxin A		37	3
GSE2742GSM60137	0.01	apratoxin A		37	6
GSE2742GSM60141	0.002	apratoxin A		37	12
GSE2742GSM60136	0.002	apratoxin A		37	6
GSE2742GSM60141	0.002	apratoxin A		37	12
GSE2742GSM60139		none		37	12
GSE2742GSM60132	0.01	apratoxin A		37	3
GSE2742GSM60129	0.002	apratoxin A		37	3
GSE2742GSM92821		none		42	12
GSE2742GSM60139		none		37	12
GSE2742GSM60128		none		37	3
GSE2742GSM60136	0.002	apratoxin A		37	6
GSE2742GSM60139		none		37	12
GSE2742GSM60129	0.002	apratoxin A		37	3
GSE2742GSM60128		none		37	3
GSE2742GSM60143	0.01	apratoxin A		37	12
GSE2742GSM60143	0.01	apratoxin A		37	12
GSE2742GSM92822		none	ultraviolet light 50 joules per square meter	37	12
GSE2742GSM92815		none	ultraviolet light 200 joules per square meter	37	12
GSE2742GSM92822		none	ultraviolet light 50 joules per square meter	37	12