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<biogps><data><item key="owner">ArrayExpress Uploader</item><item key="pop_total">0</item><item key="id">1740</item><item key="factors"><item><item key="GSE2742GSM92821"><item key="time">12</item><item key="compound">none</item><item key="irradiate">  </item><item key="temperature">42</item><item key="dose">  </item></item></item><item><item key="GSE2742GSM60137"><item key="time">6</item><item key="compound">apratoxin A</item><item key="irradiate">  </item><item key="temperature">37</item><item key="dose">0.01</item></item></item><item><item key="GSE2742GSM92819"><item key="time">12</item><item key="compound">hydrogen peroxide</item><item key="irradiate">  </item><item key="temperature">37</item><item key="dose">100</item></item></item><item><item key="GSE2742GSM60134"><item key="time">6</item><item key="compound">none</item><item key="irradiate">  </item><item key="temperature">37</item><item key="dose">  </item></item></item><item><item key="GSE2742GSM60139"><item 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key="GSE2742GSM60141"><item key="time">12</item><item key="compound">apratoxin A</item><item key="irradiate">  </item><item key="temperature">37</item><item key="dose">0.002</item></item></item><item><item key="GSE2742GSM60136"><item key="time">6</item><item key="compound">apratoxin A</item><item key="irradiate">  </item><item key="temperature">37</item><item key="dose">0.002</item></item></item><item><item key="GSE2742GSM60141"><item key="time">12</item><item key="compound">apratoxin A</item><item key="irradiate">  </item><item key="temperature">37</item><item key="dose">0.002</item></item></item><item><item key="GSE2742GSM60139"><item key="time">12</item><item key="compound">none</item><item key="irradiate">  </item><item key="temperature">37</item><item key="dose">  </item></item></item><item><item key="GSE2742GSM60132"><item key="time">3</item><item key="compound">apratoxin A</item><item key="irradiate">  </item><item key="temperature">37</item><item key="dose">0.01</item></item></item><item><item key="GSE2742GSM60129"><item key="time">3</item><item key="compound">apratoxin A</item><item key="irradiate">  </item><item key="temperature">37</item><item key="dose">0.002</item></item></item><item><item key="GSE2742GSM92821"><item key="time">12</item><item key="compound">none</item><item key="irradiate">  </item><item key="temperature">42</item><item key="dose">  </item></item></item><item><item key="GSE2742GSM60139"><item key="time">12</item><item key="compound">none</item><item key="irradiate">  </item><item key="temperature">37</item><item key="dose">  </item></item></item><item><item key="GSE2742GSM60128"><item key="time">3</item><item key="compound">none</item><item key="irradiate">  </item><item key="temperature">37</item><item key="dose">  </item></item></item><item><item key="GSE2742GSM60136"><item key="time">6</item><item key="compound">apratoxin A</item><item key="irradiate">  </item><item key="temperature">37</item><item key="dose">0.002</item></item></item><item><item key="GSE2742GSM60139"><item key="time">12</item><item key="compound">none</item><item key="irradiate">  </item><item key="temperature">37</item><item key="dose">  </item></item></item><item><item key="GSE2742GSM60129"><item key="time">3</item><item key="compound">apratoxin A</item><item key="irradiate">  </item><item key="temperature">37</item><item key="dose">0.002</item></item></item><item><item key="GSE2742GSM60128"><item key="time">3</item><item key="compound">none</item><item key="irradiate">  </item><item key="temperature">37</item><item key="dose">  </item></item></item><item><item key="GSE2742GSM60143"><item key="time">12</item><item key="compound">apratoxin A</item><item key="irradiate">  </item><item key="temperature">37</item><item key="dose">0.01</item></item></item><item><item key="GSE2742GSM60143"><item key="time">12</item><item key="compound">apratoxin A</item><item key="irradiate">  </item><item key="temperature">37</item><item key="dose">0.01</item></item></item><item><item key="GSE2742GSM92822"><item key="time">12</item><item key="compound">none</item><item key="irradiate">ultraviolet light 50 joules per square meter</item><item key="temperature">37</item><item key="dose">  </item></item></item><item><item key="GSE2742GSM92815"><item key="time">12</item><item key="compound">none</item><item key="irradiate">ultraviolet light 200 joules per square meter</item><item key="temperature">37</item><item key="dose">  </item></item></item><item><item key="GSE2742GSM92822"><item key="time">12</item><item key="compound">none</item><item key="irradiate">ultraviolet light 50 joules per square meter</item><item key="temperature">37</item><item key="dose">  </item></item></item></item><item key="ownerprofile_id">arrayexpress_sid</item><item key="platform">3</item><item key="summary_wrapped">Total RNA was extracted from apratoxin A or vehicle treated HT29 cells using the RNeasy Mini Kit (Qiagen).  Probe values from CEL files...</item><item key="pubmed_id">16474387</item><item key="geo_gse_id">E-GEOD-2742</item><item key="owner_profile">/profile/8773/arrayexpressuploader</item><item key="factor_count">5</item><item key="sample_count">27</item><item key="tags"><item>point</item></item><item key="lastmodified">Dec.12, 2014</item><item key="is_default">False</item><item key="geo_gds_id"/><item key="slug">transcription-profiling-by-array-of-human-ht29-col</item><item key="geo_id_plat">E-GEOD-2742_A-AFFY-33</item><item key="name">Transcription profiling by array of human HT29 colorectal adenocarcinoma cells after treatment with apratoxin A</item><item key="created">Jun.19, 2014</item><item key="summary">Total RNA was extracted from apratoxin A or vehicle treated HT29 cells using the RNeasy Mini Kit (Qiagen).  Probe values from CEL files were condensed to probe sets using Rosetta Resolver software.  Resolver ANOVA analysis was then performed between groups. Experiment Overall Design: 2 doses were compared to vehicle at 3 time points.  Each time point had its own vehicle control</item><item key="source">http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-2742</item><item key="species">human</item><item key="sample_source">http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-2742/samples/</item></data></biogps>
