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Home › Plugin Library › Bgee - Gene expression data in animals

Plugin: Bgee - Gene expression data in animals

1 rating | 4 users | 5 layouts

Bgee is a database to retrieve and compare normal gene expression patterns in multiple animal species, produced from multiple data types.

Registered by fbastian
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View your gene of interest

Bgee is a database to retrieve and compare gene expression patterns in multiple animal species, produced from multiple data types (RNA-Seq, Affymetrix, in situ hybridization, and EST data). Bgee is based exclusively on curated "normal", healthy, expression data (e.g., no gene knock-out, no treatment, no disease), to provide a comparable reference of normal gene expression. Bgee produces calls of presence/absence of expression, and of differential over-/under-expression, integrated along with information of gene orthology, and of homology between organs. This allows comparisons of expression patterns between species. In BioGPS, a gene page from Bgee is displayed, providing the most relevant conditions where a gene is expressed. More tools and data are available from the website http://bgee.org/

Species:
human, mouse, rat, fruitfly, nematode, zebrafish, frog, pig

URL Template:
http://bgee.org/?page=gene&gene_id={{EnsemblGene}}

Updated:
March 11, 2016

Registered:
April 4, 2012


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Tags

  • anatomical-ontology
  • anatomy
  • development
  • developmental-ontology
  • evo-devo
  • evolution
  • gene-expression
  • gene-expression-evolution
  • ontology

Often Used With

  • Gene expression/activity chart
  • Gene Identifiers
  • H-InvDB
  • Gene Wiki
  • MARRVEL

Other Formats

JSON    XML
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