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Home › Dataset Library › Transcription profiling of eyes from wild type and Bma knock-out mice after different lengths of time in a 12:12-hr LD cycle or in...

Dataset: Transcription profiling of eyes from wild type and Bma knock-out mice after different lengths of time in a 12:12-hr LD cycle or in constant darkness to identify daily rhythms in ocular gene expression

To explore daily rhythms of ocular gene expression in adult mice we performed the following experiments: i) Mice were entrained to a...

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To explore daily rhythms of ocular gene expression in adult mice we performed the following experiments: i) Mice were entrained to a 12:12-hr light-dark (LD) cycle for 3 weeks. Then mice were transferred to constant darkness (DD) or remained in LD and eyes were collected at four-hour intervals over a three-day period; ii) Bmal1-/- mice and wild-type littermates were entrained to a 12:12-hr LD cycle for 3 weeks and eyes were collected at four-hour intervals over a one-day period in LD.

Species:
mouse

Samples:
48

Source:
E-TABM-285

PubMed:
17719549

Updated:
Dec.12, 2014

Registered:
Nov.21, 2014


Factors: (via ArrayExpress)
Sample GrowthCondition Genotype StrainOrLine Time
Mus musculus 1 12:12-hr light-dark wild_type CBA/CaJ 0.5
Mus musculus 10 12:12-hr light-dark wild_type CBA/CaJ 36.5
Mus musculus 11 12:12-hr light-dark wild_type CBA/CaJ 40.5
Mus musculus 12 12:12-hr light-dark wild_type CBA/CaJ 44.5
Mus musculus 13 12:12-hr light-dark wild_type CBA/CaJ 48.5
Mus musculus 14 12:12-hr light-dark wild_type CBA/CaJ 52.5
Mus musculus 15 12:12-hr light-dark wild_type CBA/CaJ 56.5
Mus musculus 16 12:12-hr light-dark wild_type CBA/CaJ 60.5
Mus musculus 17 12:12-hr light-dark wild_type CBA/CaJ 64.5
Mus musculus 18 12:12-hr light-dark wild_type CBA/CaJ 68.5
Mus musculus 19 constant darkness wild_type CBA/CaJ 0.5
Mus musculus 2 12:12-hr light-dark wild_type CBA/CaJ 4.5
Mus musculus 20 constant darkness wild_type CBA/CaJ 4.5
Mus musculus 21 constant darkness wild_type CBA/CaJ 8.5
Mus musculus 22 constant darkness wild_type CBA/CaJ 12.5
Mus musculus 23 constant darkness wild_type CBA/CaJ 16.5
Mus musculus 24 constant darkness wild_type CBA/CaJ 20.5
Mus musculus 25 constant darkness wild_type CBA/CaJ 24.5
Mus musculus 26 constant darkness wild_type CBA/CaJ 28.5
Mus musculus 27 constant darkness wild_type CBA/CaJ 32.5
Mus musculus 28 constant darkness wild_type CBA/CaJ 36.5
Mus musculus 29 constant darkness wild_type CBA/CaJ 40.5
Mus musculus 3 12:12-hr light-dark wild_type CBA/CaJ 8.5
Mus musculus 30 constant darkness wild_type CBA/CaJ 44.5
Mus musculus 31 constant darkness wild_type CBA/CaJ 48.5
Mus musculus 32 constant darkness wild_type CBA/CaJ 52.5
Mus musculus 33 constant darkness wild_type CBA/CaJ 56.5
Mus musculus 34 constant darkness wild_type CBA/CaJ 60.5
Mus musculus 35 constant darkness wild_type CBA/CaJ 64.5
Mus musculus 36 constant darkness wild_type CBA/CaJ 68.5
Mus musculus 37 12:12-hr light-dark wild_type C57BL/6J 0.5
Mus musculus 38 12:12-hr light-dark wild_type C57BL/6J 4.5
Mus musculus 39 12:12-hr light-dark wild_type C57BL/6J 8.5
Mus musculus 4 12:12-hr light-dark wild_type CBA/CaJ 12.5
Mus musculus 40 12:12-hr light-dark wild_type C57BL/6J 12.5
Mus musculus 41 12:12-hr light-dark wild_type C57BL/6J 16.5
Mus musculus 42 12:12-hr light-dark wild_type C57BL/6J 20.5
Mus musculus 43 12:12-hr light-dark Bmal1-/- C57BL/6J 0.5
Mus musculus 44 12:12-hr light-dark Bmal1-/- C57BL/6J 4.5
Mus musculus 45 12:12-hr light-dark Bmal1-/- C57BL/6J 8.5
Mus musculus 46 12:12-hr light-dark Bmal1-/- C57BL/6J 12.5
Mus musculus 47 12:12-hr light-dark Bmal1-/- C57BL/6J 16.5
Mus musculus 48 12:12-hr light-dark Bmal1-/- C57BL/6J 20.5
Mus musculus 5 12:12-hr light-dark wild_type CBA/CaJ 16.5
Mus musculus 6 12:12-hr light-dark wild_type CBA/CaJ 20.5
Mus musculus 7 12:12-hr light-dark wild_type CBA/CaJ 24.5
Mus musculus 8 12:12-hr light-dark wild_type CBA/CaJ 28.5
Mus musculus 9 12:12-hr light-dark wild_type CBA/CaJ 32.5

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