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Home › Dataset Library › Transcription profiling of eyes from wild type and Bma knock-out mice after different lengths of time in a 12:12-hr LD cycle or in...

Dataset: Transcription profiling of eyes from wild type and Bma knock-out mice after different lengths of time in a 12:12-hr LD cycle or in constant darkness to identify daily rhythms in ocular gene expression

To explore daily rhythms of ocular gene expression in adult mice we performed the following experiments: i) Mice were entrained to a...

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To explore daily rhythms of ocular gene expression in adult mice we performed the following experiments: i) Mice were entrained to a 12:12-hr light-dark (LD) cycle for 3 weeks. Then mice were transferred to constant darkness (DD) or remained in LD and eyes were collected at four-hour intervals over a three-day period; ii) Bmal1-/- mice and wild-type littermates were entrained to a 12:12-hr LD cycle for 3 weeks and eyes were collected at four-hour intervals over a one-day period in LD.

Species:
mouse

Samples:
48

Source:
E-TABM-285

PubMed:
17719549

Updated:
Dec.12, 2014

Registered:
Nov.21, 2014


Factors: (via ArrayExpress)
Sample Time Genotype StrainOrLine GrowthCondition
Mus musculus 1 0.5 wild_type CBA/CaJ 12:12-hr light-dark
Mus musculus 10 36.5 wild_type CBA/CaJ 12:12-hr light-dark
Mus musculus 11 40.5 wild_type CBA/CaJ 12:12-hr light-dark
Mus musculus 12 44.5 wild_type CBA/CaJ 12:12-hr light-dark
Mus musculus 13 48.5 wild_type CBA/CaJ 12:12-hr light-dark
Mus musculus 14 52.5 wild_type CBA/CaJ 12:12-hr light-dark
Mus musculus 15 56.5 wild_type CBA/CaJ 12:12-hr light-dark
Mus musculus 16 60.5 wild_type CBA/CaJ 12:12-hr light-dark
Mus musculus 17 64.5 wild_type CBA/CaJ 12:12-hr light-dark
Mus musculus 18 68.5 wild_type CBA/CaJ 12:12-hr light-dark
Mus musculus 19 0.5 wild_type CBA/CaJ constant darkness
Mus musculus 2 4.5 wild_type CBA/CaJ 12:12-hr light-dark
Mus musculus 20 4.5 wild_type CBA/CaJ constant darkness
Mus musculus 21 8.5 wild_type CBA/CaJ constant darkness
Mus musculus 22 12.5 wild_type CBA/CaJ constant darkness
Mus musculus 23 16.5 wild_type CBA/CaJ constant darkness
Mus musculus 24 20.5 wild_type CBA/CaJ constant darkness
Mus musculus 25 24.5 wild_type CBA/CaJ constant darkness
Mus musculus 26 28.5 wild_type CBA/CaJ constant darkness
Mus musculus 27 32.5 wild_type CBA/CaJ constant darkness
Mus musculus 28 36.5 wild_type CBA/CaJ constant darkness
Mus musculus 29 40.5 wild_type CBA/CaJ constant darkness
Mus musculus 3 8.5 wild_type CBA/CaJ 12:12-hr light-dark
Mus musculus 30 44.5 wild_type CBA/CaJ constant darkness
Mus musculus 31 48.5 wild_type CBA/CaJ constant darkness
Mus musculus 32 52.5 wild_type CBA/CaJ constant darkness
Mus musculus 33 56.5 wild_type CBA/CaJ constant darkness
Mus musculus 34 60.5 wild_type CBA/CaJ constant darkness
Mus musculus 35 64.5 wild_type CBA/CaJ constant darkness
Mus musculus 36 68.5 wild_type CBA/CaJ constant darkness
Mus musculus 37 0.5 wild_type C57BL/6J 12:12-hr light-dark
Mus musculus 38 4.5 wild_type C57BL/6J 12:12-hr light-dark
Mus musculus 39 8.5 wild_type C57BL/6J 12:12-hr light-dark
Mus musculus 4 12.5 wild_type CBA/CaJ 12:12-hr light-dark
Mus musculus 40 12.5 wild_type C57BL/6J 12:12-hr light-dark
Mus musculus 41 16.5 wild_type C57BL/6J 12:12-hr light-dark
Mus musculus 42 20.5 wild_type C57BL/6J 12:12-hr light-dark
Mus musculus 43 0.5 Bmal1-/- C57BL/6J 12:12-hr light-dark
Mus musculus 44 4.5 Bmal1-/- C57BL/6J 12:12-hr light-dark
Mus musculus 45 8.5 Bmal1-/- C57BL/6J 12:12-hr light-dark
Mus musculus 46 12.5 Bmal1-/- C57BL/6J 12:12-hr light-dark
Mus musculus 47 16.5 Bmal1-/- C57BL/6J 12:12-hr light-dark
Mus musculus 48 20.5 Bmal1-/- C57BL/6J 12:12-hr light-dark
Mus musculus 5 16.5 wild_type CBA/CaJ 12:12-hr light-dark
Mus musculus 6 20.5 wild_type CBA/CaJ 12:12-hr light-dark
Mus musculus 7 24.5 wild_type CBA/CaJ 12:12-hr light-dark
Mus musculus 8 28.5 wild_type CBA/CaJ 12:12-hr light-dark
Mus musculus 9 32.5 wild_type CBA/CaJ 12:12-hr light-dark

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