Dataset: Transcription profiling of eyes from wild type and Bma knock-out mice after different lengths of time in a 12:12-hr LD cycle or in constant darkness to identify daily rhythms in ocular gene expression
To explore daily rhythms of ocular gene expression in adult mice we performed the following experiments: i) Mice were entrained to a...
To explore daily rhythms of ocular gene expression in adult mice we performed the following experiments: i) Mice were entrained to a 12:12-hr light-dark (LD) cycle for 3 weeks. Then mice were transferred to constant darkness (DD) or remained in LD and eyes were collected at four-hour intervals over a three-day period; ii) Bmal1-/- mice and wild-type littermates were entrained to a 12:12-hr LD cycle for 3 weeks and eyes were collected at four-hour intervals over a one-day period in LD.
- Species:
- mouse
- Samples:
- 48
- Source:
- E-TABM-285
- PubMed:
- 17719549
- Updated:
- Dec.12, 2014
- Registered:
- Nov.21, 2014
Factors:
(via ArrayExpress)
Sample | Time | Genotype | StrainOrLine | GrowthCondition |
---|---|---|---|---|
Mus musculus 1 | 0.5 | wild_type | CBA/CaJ | 12:12-hr light-dark |
Mus musculus 10 | 36.5 | wild_type | CBA/CaJ | 12:12-hr light-dark |
Mus musculus 11 | 40.5 | wild_type | CBA/CaJ | 12:12-hr light-dark |
Mus musculus 12 | 44.5 | wild_type | CBA/CaJ | 12:12-hr light-dark |
Mus musculus 13 | 48.5 | wild_type | CBA/CaJ | 12:12-hr light-dark |
Mus musculus 14 | 52.5 | wild_type | CBA/CaJ | 12:12-hr light-dark |
Mus musculus 15 | 56.5 | wild_type | CBA/CaJ | 12:12-hr light-dark |
Mus musculus 16 | 60.5 | wild_type | CBA/CaJ | 12:12-hr light-dark |
Mus musculus 17 | 64.5 | wild_type | CBA/CaJ | 12:12-hr light-dark |
Mus musculus 18 | 68.5 | wild_type | CBA/CaJ | 12:12-hr light-dark |
Mus musculus 19 | 0.5 | wild_type | CBA/CaJ | constant darkness |
Mus musculus 2 | 4.5 | wild_type | CBA/CaJ | 12:12-hr light-dark |
Mus musculus 20 | 4.5 | wild_type | CBA/CaJ | constant darkness |
Mus musculus 21 | 8.5 | wild_type | CBA/CaJ | constant darkness |
Mus musculus 22 | 12.5 | wild_type | CBA/CaJ | constant darkness |
Mus musculus 23 | 16.5 | wild_type | CBA/CaJ | constant darkness |
Mus musculus 24 | 20.5 | wild_type | CBA/CaJ | constant darkness |
Mus musculus 25 | 24.5 | wild_type | CBA/CaJ | constant darkness |
Mus musculus 26 | 28.5 | wild_type | CBA/CaJ | constant darkness |
Mus musculus 27 | 32.5 | wild_type | CBA/CaJ | constant darkness |
Mus musculus 28 | 36.5 | wild_type | CBA/CaJ | constant darkness |
Mus musculus 29 | 40.5 | wild_type | CBA/CaJ | constant darkness |
Mus musculus 3 | 8.5 | wild_type | CBA/CaJ | 12:12-hr light-dark |
Mus musculus 30 | 44.5 | wild_type | CBA/CaJ | constant darkness |
Mus musculus 31 | 48.5 | wild_type | CBA/CaJ | constant darkness |
Mus musculus 32 | 52.5 | wild_type | CBA/CaJ | constant darkness |
Mus musculus 33 | 56.5 | wild_type | CBA/CaJ | constant darkness |
Mus musculus 34 | 60.5 | wild_type | CBA/CaJ | constant darkness |
Mus musculus 35 | 64.5 | wild_type | CBA/CaJ | constant darkness |
Mus musculus 36 | 68.5 | wild_type | CBA/CaJ | constant darkness |
Mus musculus 37 | 0.5 | wild_type | C57BL/6J | 12:12-hr light-dark |
Mus musculus 38 | 4.5 | wild_type | C57BL/6J | 12:12-hr light-dark |
Mus musculus 39 | 8.5 | wild_type | C57BL/6J | 12:12-hr light-dark |
Mus musculus 4 | 12.5 | wild_type | CBA/CaJ | 12:12-hr light-dark |
Mus musculus 40 | 12.5 | wild_type | C57BL/6J | 12:12-hr light-dark |
Mus musculus 41 | 16.5 | wild_type | C57BL/6J | 12:12-hr light-dark |
Mus musculus 42 | 20.5 | wild_type | C57BL/6J | 12:12-hr light-dark |
Mus musculus 43 | 0.5 | Bmal1-/- | C57BL/6J | 12:12-hr light-dark |
Mus musculus 44 | 4.5 | Bmal1-/- | C57BL/6J | 12:12-hr light-dark |
Mus musculus 45 | 8.5 | Bmal1-/- | C57BL/6J | 12:12-hr light-dark |
Mus musculus 46 | 12.5 | Bmal1-/- | C57BL/6J | 12:12-hr light-dark |
Mus musculus 47 | 16.5 | Bmal1-/- | C57BL/6J | 12:12-hr light-dark |
Mus musculus 48 | 20.5 | Bmal1-/- | C57BL/6J | 12:12-hr light-dark |
Mus musculus 5 | 16.5 | wild_type | CBA/CaJ | 12:12-hr light-dark |
Mus musculus 6 | 20.5 | wild_type | CBA/CaJ | 12:12-hr light-dark |
Mus musculus 7 | 24.5 | wild_type | CBA/CaJ | 12:12-hr light-dark |
Mus musculus 8 | 28.5 | wild_type | CBA/CaJ | 12:12-hr light-dark |
Mus musculus 9 | 32.5 | wild_type | CBA/CaJ | 12:12-hr light-dark |