Dataset: Comparison of human Inflammatory and non-Inflammatory breast cancer samples
In this study we generated gene expression profiles of 41 and 55 samples of patients with and without inflammatory breast cancer (IBC vs....
In this study we generated gene expression profiles of 41 and 55 samples of patients with and without inflammatory breast cancer (IBC vs. non-IBC). The aim of the study was to delineate the specific transcriptional profile of the samples from patients with IBC in search for diagnostic, prognostic and predictive biomarkers.
- Species:
- human
- Samples:
- 96
- Source:
- E-MTAB-1006
- Updated:
- Dec.12, 2014
- Registered:
- Sep.22, 2014
Factors:
(via ArrayExpress)
Sample | T_Status | TumorGrading | PR_Status | ER_Status | Age | DiseaseStaging | Histology | M_Status | ErbB2_Status | N_Status | Phenotype |
---|---|---|---|---|---|---|---|---|---|---|---|
434 | 1 | 1 | 0 | 1 | 71 | 1 | IDA | 0 | 0 | 0 | non-IBC |
435 | 2 | 2 | 0 | 0 | 78 | 3 | ILA | 0 | 0 | 3 | non-IBC |
4435 | 2 | 3 | 1 | 1 | 61 | 2 | IDA | 0 | 0 | 1 | non-IBC |
4647 | 2 | 2 | 0 | 0 | 47 | 2 | IDA | 0 | 0 | 1 | non-IBC |
421 | 1 | 1 | 1 | 1 | 82 | 2 | IDA | 0 | 0 | 1 | non-IBC |
462 | 2 | 2 | 0 | 1 | 68 | 2 | IDA | 0 | 1 | 0 | non-IBC |
415 | 2 | 2 | 1 | 1 | 89 | 2 | IDA | 0 | 0 | 0 | non-IBC |
412 | 1 | 1 | 1 | 1 | 48 | 1 | IDA | 0 | 0 | 0 | non-IBC |
5075 | 1 | 1 | 1 | 1 | 52 | 2 | IDA | 0 | 0 | 1 | non-IBC |
6351 | 4 | 3 | 0 | 1 | 52 | 3 | IDA | 0 | 1 | 2 | IBC |
5118 | 3 | 1 | 0 | 1 | 67 | 2 | IDA | 0 | 0 | 0 | non-IBC |
403 | 1 | 2 | 1 | 1 | 53 | 2 | IDA | 0 | 0 | 1 | non-IBC |
4089 | 3 | 2 | 1 | 1 | 54 | 3 | IDA | 0 | 0 | 3 | non-IBC |
414 | 1 | 1 | 0 | 1 | 62 | 1 | ILA | 0 | 0 | 0 | non-IBC |
408 | 2 | 2 | 0 | 0 | 54 | 3 | IDA | 0 | 0 | 2 | non-IBC |
5032 | 2 | 2 | 0 | 1 | 47 | 4 | IDA | 1 | 0 | 2 | non-IBC |
414 | 1 | 1 | 0 | 1 | 62 | 1 | ILA | 0 | 0 | 0 | non-IBC |
3149 | 2 | 2 | 1 | 1 | 50 | 2 | IDA | 0 | 0 | 1 | non-IBC |
457 | 2 | 1 | 1 | 1 | 39 | 2 | IDA | 0 | 0 | 0 | non-IBC |
203 | 2 | 1 | 0 | 1 | 65 | 2 | IDA | 0 | 0 | 0 | non-IBC |
455 | 4 | 2 | 0 | 1 | 78 | 4 | IDA | 1 | 0 | 3 | IBC |
433 | 1 | 2 | 1 | 1 | 64 | 1 | IDA | 0 | 0 | 0 | non-IBC |
849 | 1 | 1 | 1 | 1 | 50 | 1 | IDA | 0 | 0 | 0 | non-IBC |
824 | 2 | 3 | 0 | 0 | 56 | 4 | IDA | 1 | 1 | 3 | non-IBC |
843 | 4 | 3 | 0 | 0 | 68 | 4 | IDA | 1 | 1 | 2 | IBC |
6269 | 4 | 2 | 0 | 1 | 78 | 4 | IDA | 1 | 0 | 2 | IBC |
454 | 4 | 3 | 1 | 1 | 70 | 4 | IDA | 1 | 0 | 2 | IBC |
5336 | 4 | 3 | 1 | 1 | 54 | 4 | IDA | 1 | 0 | 2 | IBC |
5087 | 4 | 3 | 0 | 0 | 65 | 4 | IDA | 1 | 1 | 3 | IBC |
4444 | 4 | 2 | 0 | 0 | 57 | 4 | IDA | 1 | 1 | 1 | IBC |
4475 | 3 | 3 | 1 | 1 | 50 | 3 | MIXED | 0 | 1 | 2 | non-IBC |
3233 | 3 | 2 | 1 | 1 | 69 | 4 | IDA | 1 | 1 | 0 | non-IBC |
449 | 4 | 3 | 0 | 1 | 51 | 3 | IDA | 0 | 0 | 1 | IBC |
4238 | 2 | 3 | 0 | 0 | 31 | 2 | IDA | 0 | 1 | 1 | non-IBC |
459 | 2 | 2 | 1 | 1 | 59 | 2 | ILA | 0 | 0 | 1 | non-IBC |
447 | 1 | 1 | 1 | 1 | 69 | 1 | IDA | 0 | 0 | 0 | non-IBC |
5155 | 4 | 2 | 1 | 1 | 59 | 3 | IDA | 0 | 1 | 1 | IBC |
5134 | 4 | 2 | 0 | 0 | 66 | 3 | IDA | 0 | 0 | 2 | IBC |
6210 | 4 | 2 | 1 | 1 | 69 | 3 | IDA | 0 | 0 | 2 | non-IBC |
440 | 1 | 2 | 0 | 1 | 53 | 1 | IDA | 0 | 0 | 0 | non-IBC |
5018 | 4 | 3 | 1 | 1 | 80 | 3 | IDA | 0 | 0 | 3 | non-IBC |
6155 | 3 | 3 | 1 | 1 | 68 | 2 | ILA | 0 | 0 | 0 | non-IBC |
448 | 4 | 3 | 0 | 0 | 50 | 4 | IDA | 1 | 1 | 1 | IBC |
4261 | 1 | 3 | 0 | 1 | 53 | 1 | IDA | 0 | 0 | 0 | non-IBC |
552 | 3 | 2 | 1 | 1 | 75 | 3 | IDA | 0 | 0 | 3 | non-IBC |
618 | 4 | 2 | 0 | 1 | 74 | 3 | IDA | 0 | 0 | 2 | IBC |
432 | 2 | 2 | 0 | 1 | 56 | 2 | IDA | 0 | 0 | 1 | non-IBC |
428 | 1 | 1 | 1 | 1 | 64 | 1 | IDA | 0 | 0 | 0 | non-IBC |
5036 | 1 | 1 | 1 | 1 | 46 | 1 | ILA | 0 | 0 | 0 | non-IBC |
391 | 1 | 1 | 1 | 1 | 43 | 1 | IDA | 0 | 0 | 0 | non-IBC |
6226 | 4 | 2 | 0 | 0 | 61 | 3 | IDA | 0 | 0 | 1 | IBC |
6034 | 4 | 3 | 0 | 0 | 45 | 3 | IDA | 0 | 1 | 1 | IBC |
420 | 4 | 2 | 0 | 1 | 60 | 3 | ILA | 0 | 0 | 1 | IBC |
5611 | 3 | 1 | 0 | 1 | 72 | 3 | IDA | 0 | 0 | 3 | non-IBC |
591 | 1 | 1 | 1 | 1 | 52 | 1 | IDA | 0 | 0 | 0 | non-IBC |
456 | 1 | 3 | 1 | 1 | 35 | 4 | IDA | 1 | 0 | 1 | non-IBC |
4600 | 4 | 3 | 1 | 1 | 71 | 3 | IDA | 0 | 0 | 2 | IBC |
6395 | 4 | 3 | 0 | 1 | 63 | 3 | ILA | 0 | 0 | 2 | IBC |
8579 | 4 | 3 | 1 | 1 | 80 | 3 | IDA | 0 | 1 | 3 | IBC |
8454 | 4 | 3 | 1 | 1 | 80 | 3 | IDA | 0 | 0 | 1 | IBC |
7404 | 4 | 3 | 0 | 1 | 61 | 3 | IDA | 0 | 0 | 1 | IBC |
4802 | 4 | 2 | 0 | 1 | 44 | 3 | IDA | 0 | 0 | 1 | IBC |
7404 | 4 | 3 | 0 | 1 | 61 | 3 | IDA | 0 | 0 | 1 | IBC |
7194 | 4 | 3 | 0 | 1 | 61 | 4 | IDA | 1 | 1 | 1 | IBC |
6543 | 4 | 3 | 1 | 1 | 64 | 4 | IDA | 1 | 0 | 3 | IBC |
7401 | 4 | 3 | 1 | 1 | 42 | 4 | IDA | 1 | 0 | 0 | IBC |
4546 | 4 | 2 | 1 | 1 | 49 | 4 | IDA | 1 | 0 | 3 | IBC |
7024 | 4 | 2 | 0 | 1 | 63 | 3 | ILA | 0 | 0 | 2 | IBC |
655 | 1 | 2 | 1 | 1 | 55 | 3 | IDA | 0 | 0 | 2 | non-IBC |
385 | 1 | 1 | 0 | 1 | 77 | 1 | IDA | 0 | 0 | 0 | non-IBC |
399 | 2 | 3 | 0 | 0 | 48 | 2 | IDA | 0 | 0 | 1 | non-IBC |
469 | 2 | 1 | 0 | 0 | 65 | 2 | IDA | 0 | 0 | 2 | non-IBC |
7069 | 2 | 3 | 1 | 1 | 76 | 3 | IDA | 0 | 0 | 3 | non-IBC |
7074 | 2 | 3 | 1 | 1 | 53 | 2 | IDA | 0 | 1 | 0 | non-IBC |
7076 | 1 | 3 | 1 | 1 | 65 | 2 | IDA | 0 | 1 | 1 | non-IBC |
7078 | 2 | 2 | 0 | 1 | 65 | 2 | ILA | 0 | 1 | 0 | non-IBC |
7087 | 1 | 2 | 0 | 0 | 72 | 1 | IDA | 0 | 0 | 0 | non-IBC |
7101 | 3 | 3 | 1 | 1 | 30 | 3 | IDA | 0 | 0 | 1 | non-IBC |
7116 | 2 | 3 | 0 | 0 | 57 | 2 | IDA | 0 | 1 | 1 | non-IBC |
7125 | 1 | 3 | 1 | 1 | 67 | 1 | IDA | 0 | 0 | 0 | non-IBC |
7181 | 2 | 3 | 0 | 0 | 54 | 3 | IDA | 0 | 0 | 2 | non-IBC |
7226 | 1 | 3 | 0 | 0 | 86 | 1 | IDA | 0 | 1 | 0 | non-IBC |
7282 | 2 | 3 | 0 | 0 | 43 | 2 | IDA | 0 | 0 | 0 | non-IBC |
8466 | 4 | 3 | 0 | 0 | 45 | 3 | IDA | 0 | 0 | 3 | IBC |
174 | 4 | 3 | 0 | 0 | 66 | 4 | IDA | 1 | 0 | 2 | IBC |
182 | 4 | 3 | 0 | 0 | 57 | 3 | IDA | 0 | 0 | 2 | IBC |
258 | 4 | 3 | 0 | 0 | 68 | 3 | ILA | 0 | 0 | 1 | IBC |
189 | 4 | 2 | 0 | 0 | 45 | 3 | IDA | 0 | 1 | 2 | IBC |
427 | 4 | 2 | 0 | 0 | 47 | 3 | IDA | 0 | 0 | 3 | IBC |
426 | 4 | 3 | 0 | 0 | 70 | 3 | IDA | 0 | 0 | 2 | IBC |
335 | 4 | 3 | 0 | 0 | 51 | 3 | IDA | 0 | 1 | 2 | IBC |
599 | 4 | 2 | 1 | 1 | 57 | 4 | IDA | 1 | 0 | 2 | IBC |
602 | 4 | 3 | 0 | 0 | 49 | 3 | IDA | 0 | 1 | 2 | IBC |
422 | 4 | 3 | 0 | 0 | 54 | 3 | IDA | 0 | 0 | 2 | IBC |
9354 | 4 | 2 | 1 | 1 | 49 | 3 | IDA | 0 | 0 | 1 | IBC |
4600 | 4 | 3 | 1 | 1 | 71 | 3 | IDA | 0 | 0 | 2 | IBC |