Dataset: Comparison of human Inflammatory and non-Inflammatory breast cancer samples
In this study we generated gene expression profiles of 41 and 55 samples of patients with and without inflammatory breast cancer (IBC vs....
In this study we generated gene expression profiles of 41 and 55 samples of patients with and without inflammatory breast cancer (IBC vs. non-IBC). The aim of the study was to delineate the specific transcriptional profile of the samples from patients with IBC in search for diagnostic, prognostic and predictive biomarkers.
- Species:
- human
- Samples:
- 96
- Source:
- E-MTAB-1006
- Updated:
- Dec.12, 2014
- Registered:
- Sep.22, 2014
Factors:
(via ArrayExpress)
| Sample | T_Status | TumorGrading | PR_Status | ER_Status | Age | DiseaseStaging | Phenotype | M_Status | ErbB2_Status | N_Status | Histology |
|---|---|---|---|---|---|---|---|---|---|---|---|
| 434 | 1 | 1 | 0 | 1 | 71 | 1 | non-IBC | 0 | 0 | 0 | IDA |
| 435 | 2 | 2 | 0 | 0 | 78 | 3 | non-IBC | 0 | 0 | 3 | ILA |
| 4435 | 2 | 3 | 1 | 1 | 61 | 2 | non-IBC | 0 | 0 | 1 | IDA |
| 4647 | 2 | 2 | 0 | 0 | 47 | 2 | non-IBC | 0 | 0 | 1 | IDA |
| 421 | 1 | 1 | 1 | 1 | 82 | 2 | non-IBC | 0 | 0 | 1 | IDA |
| 462 | 2 | 2 | 0 | 1 | 68 | 2 | non-IBC | 0 | 1 | 0 | IDA |
| 415 | 2 | 2 | 1 | 1 | 89 | 2 | non-IBC | 0 | 0 | 0 | IDA |
| 412 | 1 | 1 | 1 | 1 | 48 | 1 | non-IBC | 0 | 0 | 0 | IDA |
| 5075 | 1 | 1 | 1 | 1 | 52 | 2 | non-IBC | 0 | 0 | 1 | IDA |
| 6351 | 4 | 3 | 0 | 1 | 52 | 3 | IBC | 0 | 1 | 2 | IDA |
| 5118 | 3 | 1 | 0 | 1 | 67 | 2 | non-IBC | 0 | 0 | 0 | IDA |
| 403 | 1 | 2 | 1 | 1 | 53 | 2 | non-IBC | 0 | 0 | 1 | IDA |
| 4089 | 3 | 2 | 1 | 1 | 54 | 3 | non-IBC | 0 | 0 | 3 | IDA |
| 414 | 1 | 1 | 0 | 1 | 62 | 1 | non-IBC | 0 | 0 | 0 | ILA |
| 408 | 2 | 2 | 0 | 0 | 54 | 3 | non-IBC | 0 | 0 | 2 | IDA |
| 5032 | 2 | 2 | 0 | 1 | 47 | 4 | non-IBC | 1 | 0 | 2 | IDA |
| 414 | 1 | 1 | 0 | 1 | 62 | 1 | non-IBC | 0 | 0 | 0 | ILA |
| 3149 | 2 | 2 | 1 | 1 | 50 | 2 | non-IBC | 0 | 0 | 1 | IDA |
| 457 | 2 | 1 | 1 | 1 | 39 | 2 | non-IBC | 0 | 0 | 0 | IDA |
| 203 | 2 | 1 | 0 | 1 | 65 | 2 | non-IBC | 0 | 0 | 0 | IDA |
| 455 | 4 | 2 | 0 | 1 | 78 | 4 | IBC | 1 | 0 | 3 | IDA |
| 433 | 1 | 2 | 1 | 1 | 64 | 1 | non-IBC | 0 | 0 | 0 | IDA |
| 849 | 1 | 1 | 1 | 1 | 50 | 1 | non-IBC | 0 | 0 | 0 | IDA |
| 824 | 2 | 3 | 0 | 0 | 56 | 4 | non-IBC | 1 | 1 | 3 | IDA |
| 843 | 4 | 3 | 0 | 0 | 68 | 4 | IBC | 1 | 1 | 2 | IDA |
| 6269 | 4 | 2 | 0 | 1 | 78 | 4 | IBC | 1 | 0 | 2 | IDA |
| 454 | 4 | 3 | 1 | 1 | 70 | 4 | IBC | 1 | 0 | 2 | IDA |
| 5336 | 4 | 3 | 1 | 1 | 54 | 4 | IBC | 1 | 0 | 2 | IDA |
| 5087 | 4 | 3 | 0 | 0 | 65 | 4 | IBC | 1 | 1 | 3 | IDA |
| 4444 | 4 | 2 | 0 | 0 | 57 | 4 | IBC | 1 | 1 | 1 | IDA |
| 4475 | 3 | 3 | 1 | 1 | 50 | 3 | non-IBC | 0 | 1 | 2 | MIXED |
| 3233 | 3 | 2 | 1 | 1 | 69 | 4 | non-IBC | 1 | 1 | 0 | IDA |
| 449 | 4 | 3 | 0 | 1 | 51 | 3 | IBC | 0 | 0 | 1 | IDA |
| 4238 | 2 | 3 | 0 | 0 | 31 | 2 | non-IBC | 0 | 1 | 1 | IDA |
| 459 | 2 | 2 | 1 | 1 | 59 | 2 | non-IBC | 0 | 0 | 1 | ILA |
| 447 | 1 | 1 | 1 | 1 | 69 | 1 | non-IBC | 0 | 0 | 0 | IDA |
| 5155 | 4 | 2 | 1 | 1 | 59 | 3 | IBC | 0 | 1 | 1 | IDA |
| 5134 | 4 | 2 | 0 | 0 | 66 | 3 | IBC | 0 | 0 | 2 | IDA |
| 6210 | 4 | 2 | 1 | 1 | 69 | 3 | non-IBC | 0 | 0 | 2 | IDA |
| 440 | 1 | 2 | 0 | 1 | 53 | 1 | non-IBC | 0 | 0 | 0 | IDA |
| 5018 | 4 | 3 | 1 | 1 | 80 | 3 | non-IBC | 0 | 0 | 3 | IDA |
| 6155 | 3 | 3 | 1 | 1 | 68 | 2 | non-IBC | 0 | 0 | 0 | ILA |
| 448 | 4 | 3 | 0 | 0 | 50 | 4 | IBC | 1 | 1 | 1 | IDA |
| 4261 | 1 | 3 | 0 | 1 | 53 | 1 | non-IBC | 0 | 0 | 0 | IDA |
| 552 | 3 | 2 | 1 | 1 | 75 | 3 | non-IBC | 0 | 0 | 3 | IDA |
| 618 | 4 | 2 | 0 | 1 | 74 | 3 | IBC | 0 | 0 | 2 | IDA |
| 432 | 2 | 2 | 0 | 1 | 56 | 2 | non-IBC | 0 | 0 | 1 | IDA |
| 428 | 1 | 1 | 1 | 1 | 64 | 1 | non-IBC | 0 | 0 | 0 | IDA |
| 5036 | 1 | 1 | 1 | 1 | 46 | 1 | non-IBC | 0 | 0 | 0 | ILA |
| 391 | 1 | 1 | 1 | 1 | 43 | 1 | non-IBC | 0 | 0 | 0 | IDA |
| 6226 | 4 | 2 | 0 | 0 | 61 | 3 | IBC | 0 | 0 | 1 | IDA |
| 6034 | 4 | 3 | 0 | 0 | 45 | 3 | IBC | 0 | 1 | 1 | IDA |
| 420 | 4 | 2 | 0 | 1 | 60 | 3 | IBC | 0 | 0 | 1 | ILA |
| 5611 | 3 | 1 | 0 | 1 | 72 | 3 | non-IBC | 0 | 0 | 3 | IDA |
| 591 | 1 | 1 | 1 | 1 | 52 | 1 | non-IBC | 0 | 0 | 0 | IDA |
| 456 | 1 | 3 | 1 | 1 | 35 | 4 | non-IBC | 1 | 0 | 1 | IDA |
| 4600 | 4 | 3 | 1 | 1 | 71 | 3 | IBC | 0 | 0 | 2 | IDA |
| 6395 | 4 | 3 | 0 | 1 | 63 | 3 | IBC | 0 | 0 | 2 | ILA |
| 8579 | 4 | 3 | 1 | 1 | 80 | 3 | IBC | 0 | 1 | 3 | IDA |
| 8454 | 4 | 3 | 1 | 1 | 80 | 3 | IBC | 0 | 0 | 1 | IDA |
| 7404 | 4 | 3 | 0 | 1 | 61 | 3 | IBC | 0 | 0 | 1 | IDA |
| 4802 | 4 | 2 | 0 | 1 | 44 | 3 | IBC | 0 | 0 | 1 | IDA |
| 7404 | 4 | 3 | 0 | 1 | 61 | 3 | IBC | 0 | 0 | 1 | IDA |
| 7194 | 4 | 3 | 0 | 1 | 61 | 4 | IBC | 1 | 1 | 1 | IDA |
| 6543 | 4 | 3 | 1 | 1 | 64 | 4 | IBC | 1 | 0 | 3 | IDA |
| 7401 | 4 | 3 | 1 | 1 | 42 | 4 | IBC | 1 | 0 | 0 | IDA |
| 4546 | 4 | 2 | 1 | 1 | 49 | 4 | IBC | 1 | 0 | 3 | IDA |
| 7024 | 4 | 2 | 0 | 1 | 63 | 3 | IBC | 0 | 0 | 2 | ILA |
| 655 | 1 | 2 | 1 | 1 | 55 | 3 | non-IBC | 0 | 0 | 2 | IDA |
| 385 | 1 | 1 | 0 | 1 | 77 | 1 | non-IBC | 0 | 0 | 0 | IDA |
| 399 | 2 | 3 | 0 | 0 | 48 | 2 | non-IBC | 0 | 0 | 1 | IDA |
| 469 | 2 | 1 | 0 | 0 | 65 | 2 | non-IBC | 0 | 0 | 2 | IDA |
| 7069 | 2 | 3 | 1 | 1 | 76 | 3 | non-IBC | 0 | 0 | 3 | IDA |
| 7074 | 2 | 3 | 1 | 1 | 53 | 2 | non-IBC | 0 | 1 | 0 | IDA |
| 7076 | 1 | 3 | 1 | 1 | 65 | 2 | non-IBC | 0 | 1 | 1 | IDA |
| 7078 | 2 | 2 | 0 | 1 | 65 | 2 | non-IBC | 0 | 1 | 0 | ILA |
| 7087 | 1 | 2 | 0 | 0 | 72 | 1 | non-IBC | 0 | 0 | 0 | IDA |
| 7101 | 3 | 3 | 1 | 1 | 30 | 3 | non-IBC | 0 | 0 | 1 | IDA |
| 7116 | 2 | 3 | 0 | 0 | 57 | 2 | non-IBC | 0 | 1 | 1 | IDA |
| 7125 | 1 | 3 | 1 | 1 | 67 | 1 | non-IBC | 0 | 0 | 0 | IDA |
| 7181 | 2 | 3 | 0 | 0 | 54 | 3 | non-IBC | 0 | 0 | 2 | IDA |
| 7226 | 1 | 3 | 0 | 0 | 86 | 1 | non-IBC | 0 | 1 | 0 | IDA |
| 7282 | 2 | 3 | 0 | 0 | 43 | 2 | non-IBC | 0 | 0 | 0 | IDA |
| 8466 | 4 | 3 | 0 | 0 | 45 | 3 | IBC | 0 | 0 | 3 | IDA |
| 174 | 4 | 3 | 0 | 0 | 66 | 4 | IBC | 1 | 0 | 2 | IDA |
| 182 | 4 | 3 | 0 | 0 | 57 | 3 | IBC | 0 | 0 | 2 | IDA |
| 258 | 4 | 3 | 0 | 0 | 68 | 3 | IBC | 0 | 0 | 1 | ILA |
| 189 | 4 | 2 | 0 | 0 | 45 | 3 | IBC | 0 | 1 | 2 | IDA |
| 427 | 4 | 2 | 0 | 0 | 47 | 3 | IBC | 0 | 0 | 3 | IDA |
| 426 | 4 | 3 | 0 | 0 | 70 | 3 | IBC | 0 | 0 | 2 | IDA |
| 335 | 4 | 3 | 0 | 0 | 51 | 3 | IBC | 0 | 1 | 2 | IDA |
| 599 | 4 | 2 | 1 | 1 | 57 | 4 | IBC | 1 | 0 | 2 | IDA |
| 602 | 4 | 3 | 0 | 0 | 49 | 3 | IBC | 0 | 1 | 2 | IDA |
| 422 | 4 | 3 | 0 | 0 | 54 | 3 | IBC | 0 | 0 | 2 | IDA |
| 9354 | 4 | 2 | 1 | 1 | 49 | 3 | IBC | 0 | 0 | 1 | IDA |
| 4600 | 4 | 3 | 1 | 1 | 71 | 3 | IBC | 0 | 0 | 2 | IDA |