BioGPS
  • Home
  • Help
  • Plugins
  • Datasets
  • Sign Up
  • Login
Examples: Gene Symbol(s), Gene Ontology, Splicing plugins, Melanoma datasets
advanced
Home › Dataset Library › miR-28 expression in the Burkitt lymphoma cell line P3HR1

Dataset: miR-28 expression in the Burkitt lymphoma cell line P3HR1

Burkitt lymphoma (BL) is a highly aggressive B cell non-Hodgkin lymphoma (B-NHL), which originates from germinal center (GC) B cells and...

Registered by ArrayExpress Uploader
View Dataset

Burkitt lymphoma (BL) is a highly aggressive B cell non-Hodgkin lymphoma (B-NHL), which originates from germinal center (GC) B cells and harbors translocations deregulating the MYC oncogene. A comparative analysis of microRNAs (miRNAs) expressed in normal and malignant GC B cells identified miR-28 as significantly down-regulated in BL, as well as in other GC-derived B-NHL. We show that re-expression of miR-28 impairs cell growth and clonogenic properties of BL cells by modulating several targets including MAD2L1, a component of the spindle checkpoint whose down-regulation is essential in mediating miR-28-induced growth-arrest, and BAG1, an activator of the ERK pathway. P3HR1 Burkitt lymphoma cell line was engineered to display inducible expression of GFP alone or GFP in combination with the miR-28 precursor from the pRTS1 vector upon doxycycline treatment. Two bulk populations (A and B) were established for both the control (GFP alone) and the miR28-expressing (GFP and miR-28 precursor) cells. Cells were induced with 0.1ug/ml doxycycline for 12h or 24h. Induction was performed on each bulk population in triplicates.

Species:
human

Samples:
24

Source:
E-GEOD-56268

PubMed:
24843176

Updated:
Dec.12, 2014

Registered:
Jul.10, 2014


Factors: (via ArrayExpress)
Sample TIME GENOTYPE BULK POPULATION TREATMENT
GSM1358030 24h miR28 B Doxycycline [0.1ug/ml], 24h
GSM1358030 24h miR28 B Doxycycline [0.1ug/ml], 24h
GSM1358030 24h miR28 B Doxycycline [0.1ug/ml], 24h
GSM1358027 24h miR28 A Doxycycline [0.1ug/ml], 24h
GSM1358027 24h miR28 A Doxycycline [0.1ug/ml], 24h
GSM1358027 24h miR28 A Doxycycline [0.1ug/ml], 24h
GSM1358024 24h control B Doxycycline [0.1ug/ml], 24h
GSM1358024 24h control B Doxycycline [0.1ug/ml], 24h
GSM1358024 24h control B Doxycycline [0.1ug/ml], 24h
GSM135802 24h control A Doxycycline [0.1ug/ml], 24h
GSM135802 24h control A Doxycycline [0.1ug/ml], 24h
GSM135802 24h control A Doxycycline [0.1ug/ml], 24h
GSM1358018 12h miR28 B Doxycycline [0.1ug/ml], 12h
GSM1358018 12h miR28 B Doxycycline [0.1ug/ml], 12h
GSM1358018 12h miR28 B Doxycycline [0.1ug/ml], 12h
GSM1358015 12h miR28 A Doxycycline [0.1ug/ml], 12h
GSM1358015 12h miR28 A Doxycycline [0.1ug/ml], 12h
GSM1358015 12h miR28 A Doxycycline [0.1ug/ml], 12h
GSM1358012 12h control B Doxycycline [0.1ug/ml], 12h
GSM1358012 12h control B Doxycycline [0.1ug/ml], 12h
GSM1358012 12h control B Doxycycline [0.1ug/ml], 12h
GSM1358009 12h control A Doxycycline [0.1ug/ml], 12h
GSM1358009 12h control A Doxycycline [0.1ug/ml], 12h
GSM1358009 12h control A Doxycycline [0.1ug/ml], 12h

Tags

  • burkitt lymphoma
  • cell
  • hodgkin lymphoma
  • line
  • lymphoma
  • non-hodgkin lymphoma
  • spindle

Other Formats

JSON    XML
  • About
  • Blog
  • Help
  • FAQ
  • Downloads
  • API
  • iPhone App
  • Email updates
© 2025 The Scripps Research Institute. All rights reserved. (ver 94eefe6 )
  • Terms of Use