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Home › Dataset Library › Gene expression Profiling in Follicular Lymphomas

Dataset: Gene expression Profiling in Follicular Lymphomas

Follicular lymphoma (FL) is an indolent, but incurable subtype of non-Hodgkin lymphoma. These tumor harbor t (14;18) translocation in at...

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Follicular lymphoma (FL) is an indolent, but incurable subtype of non-Hodgkin lymphoma. These tumor harbor t (14;18) translocation in at least 90% of patients. Recently, activating EZH2 mutations have been Follicular lymphoma (FL) is an indolent, but incurable subtype of non-Hodgkin lymphoma. These tumor harbor t (14;18) translocation in at least 90% of patients. Recently, activating EZH2 mutations have been found in a significant number of patients with FL. Gene expression profiling (GEP) was performed to determine differential gene-expression between the EZH2 mutated vs unmutated subgroups in FL. Total RNA extracted from fresh frozen specimens with FL diagnosis were processed for hybridization to Affymetrix HG-U133 plus 2 arrays. To enhance the identification of differential gene expression in FL tumor cells only, FL cases with a high B-cell content (enriched B-cell signature of >2-fold above the mean of the B-cell signature (pan B-cell markers) in the entire FL data set) were chosen for analysis.

Species:
human

Samples:
69

Source:
E-GEOD-55267

PubMed:
24634383

Updated:
Dec.12, 2014

Registered:
Jul.10, 2014


Factors: (via ArrayExpress)
Sample EZH2 MUTATION AGE FL GRADE ORGANISM PART
GSM1333052 WT 49 3 Follicular Lymphoma
GSM133305 WT 55 3a Follicular Lymphoma
GSM1333050 WT 41 1 Follicular Lymphoma
GSM1333049 WT 40 3 Follicular Lymphoma
GSM1333048 WT 54 3 Follicular Lymphoma
GSM1333047 WT 64 3 Follicular Lymphoma
GSM1333046 WT 36 1 Follicular Lymphoma
GSM1333045 WT 54 2 Follicular Lymphoma
GSM1333044 WT 70 2 Follicular Lymphoma
GSM1333043 WT 58 3 Follicular Lymphoma
GSM1333042 WT NA NA Follicular Lymphoma
GSM133304 WT 60 1 Follicular Lymphoma
GSM1333040 WT 38 3 Follicular Lymphoma
GSM1333039 WT 61 1 Follicular Lymphoma
GSM1333038 WT 48 1 Follicular Lymphoma
GSM1333037 WT 58 2 Follicular Lymphoma
GSM1333036 WT 53 1 Follicular Lymphoma
GSM1333035 WT 56 2 Follicular Lymphoma
GSM1333034 WT 44 2 Follicular Lymphoma
GSM1333033 WT 44 3 Follicular Lymphoma
GSM1333032 WT 46 1 Follicular Lymphoma
GSM1333042 WT NA NA Follicular Lymphoma
GSM1333030 WT 55 2 Follicular Lymphoma
GSM1333029 WT 65 3 Follicular Lymphoma
GSM1333028 WT 58 1 Follicular Lymphoma
GSM1333027 WT 66 2 Follicular Lymphoma
GSM1333026 WT 69 2 Follicular Lymphoma
GSM1333049 WT 40 3 Follicular Lymphoma
GSM1333024 WT 70 3 Follicular Lymphoma
GSM1333049 WT 40 3 Follicular Lymphoma
GSM1333022 WT NA not specified Follicular Lymphoma
GSM133302 WT 62 1 Follicular Lymphoma
GSM1333020 NA NA NA Na�ve_B cell
GSM1333020 NA NA NA Na�ve_B cell
GSM1333018 NA NA NA Centrocyte
GSM1333018 NA NA NA Centrocyte
GSM1333016 NA NA NA Centroblast
GSM1333016 NA NA NA Centroblast
GSM1333038 WT 48 1 Follicular Lymphoma
GSM1333013 WT 63 1 Follicular Lymphoma
GSM1333027 WT 66 2 Follicular Lymphoma
GSM13330 WT 47 2 Follicular Lymphoma
GSM1333010 WT 67 1 Follicular Lymphoma
GSM1333009 WT 51 1 Follicular Lymphoma
GSM1333008 WT 75 1 Follicular Lymphoma
GSM1333007 WT 69 3 Follicular Lymphoma
GSM1333032 WT 46 1 Follicular Lymphoma
GSM1333005 WT 80 2 Follicular Lymphoma
GSM1333027 WT 66 2 Follicular Lymphoma
GSM1333003 WT 35 2 Follicular Lymphoma
GSM1333002 WT 56 1 Follicular Lymphoma
GSM133300 WT 60 2 Follicular Lymphoma
GSM1333000 WT 60 3 Follicular Lymphoma
GSM1332999 WT NA 2 Follicular Lymphoma
GSM1332998 WT 73 3 Follicular Lymphoma
GSM1332997 WT NA 3a Follicular Lymphoma
GSM1332996 WT 69 3a Follicular Lymphoma
GSM1332995 Y641S 67 NA Follicular Lymphoma
GSM1332994 Y641S 54 2 Follicular Lymphoma
GSM1332993 Y641S 71 1 Follicular Lymphoma
GSM1332992 Y641N 67 2 Follicular Lymphoma
GSM133299 Y641H 51 1 Follicular Lymphoma
GSM1332990 Y641H 67 1 Follicular Lymphoma
GSM1332989 Y641F 56 2 Follicular Lymphoma
GSM1332988 Y641F 45 2 Follicular Lymphoma
GSM1332987 Y641F NA 2 Follicular Lymphoma
GSM1332986 Y641F 60 2 Follicular Lymphoma
GSM1332985 Y641C 84 3a Follicular Lymphoma
GSM1332984 Y641C 51 2 Follicular Lymphoma

Tags

  • cell
  • follicular lymphoma
  • hodgkin lymphoma
  • lymphoma
  • non-hodgkin lymphoma

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