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Home › Dataset Library › Expression data from periplaque regions in multiple sclerosis spinal cord

Dataset: Expression data from periplaque regions in multiple sclerosis spinal cord

There have been few studies that have focused on the periplaque regions surrounding demyelinated plaques, especially in spinal cords....

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There have been few studies that have focused on the periplaque regions surrounding demyelinated plaques, especially in spinal cords. Areas of incomplete demyelination have been demonstrated but poorly studied. The present study aimed to analyze the molecular immunopathology of periplaque demyelinated lesions (PDLs) in the spinal cord of patients with secondary progressive multiple sclerosis (MS). To achieve this goal, the transcriptomic profiles of PDLs were analyzed in post-mortem tissues derived from the cervical spinal cord of 8 patients with primary or secondary progressive MS. Sixteen spinal cord samples were microdissected for RNA extraction and hybridization on Affymetrix microarrays. Eight periplaque samples (P) were compared to normal appearing white matter (N) from the same patient.

Species:
human

Samples:
16

Source:
E-GEOD-52139

Updated:
Dec.12, 2014

Registered:
Sep.21, 2014


Factors: (via ArrayExpress)
Sample DISEASE DURATION ORGANISM PART AGE AT DEATH SEX
GSM1260234 25 periplaque region from MS spinal cord 46 female
GSM1260235 25 normal appearing white matter from MS spinal cord 46 female
GSM1260236 26 periplaque region from MS spinal cord 61 male
GSM1260237 26 normal appearing white matter from MS spinal cord 61 male
GSM1260238 24 periplaque region from MS spinal cord 52 female
GSM1260239 24 normal appearing white matter from MS spinal cord 52 female
GSM1260240 28 periplaque region from MS spinal cord 54 female
GSM126024 28 normal appearing white matter from MS spinal cord 54 female
GSM1260242 22 periplaque region from MS spinal cord 39 female
GSM1260243 22 normal appearing white matter from MS spinal cord 39 female
GSM1260244 20 periplaque region from MS spinal cord 46 male
GSM1260245 20 normal appearing white matter from MS spinal cord 46 male
GSM1260246 36 periplaque region from MS spinal cord 52 female
GSM1260247 36 normal appearing white matter from MS spinal cord 52 female
GSM1260248 19 periplaque region from MS spinal cord 62 female
GSM1260249 19 normal appearing white matter from MS spinal cord 62 female

Tags

  • multiple sclerosis
  • secondary progressive multiple sclerosis
  • spinal cord

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