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Home › Dataset Library › Examining efficiency of enrichment of kidney pericyte-specific messages by TRAP (Translating Ribosome Affinity Purification)

Dataset: Examining efficiency of enrichment of kidney pericyte-specific messages by TRAP (Translating Ribosome Affinity Purification)

The long term goal is to define the transcriptional changes that accompany pericyte-to-myofibroblast transition in fibrotic kidney...

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The long term goal is to define the transcriptional changes that accompany pericyte-to-myofibroblast transition in fibrotic kidney disease. Medullary pericytes are identified by their expression of a eGFPL10a fusion protein whose expression is driven by a Col1a1 promoter. Pericyte-specific RNA is generated by eGFP-affinity purification of polysomes from medullary lysates and then subject to microarray analysis. Col1a1-eGFPL10a mice were subject to Sham or unilateral ureteral obstruction surgery. Sham kidneys were collected at day 0, and UUO kidneys were collected at day 2 or day 5 for TRAP.

Species:
mouse

Samples:
15

Source:
E-GEOD-50439

Updated:
Dec.12, 2014

Registered:
Nov.12, 2014


Factors: (via ArrayExpress)
Sample URL ORGANISM PART TIME
GSM1219324 http://www.gudmap.org/gudmap/pages/mic_submission.html?id=GUDMAP:21179 kidney pericytes (periarterial fibroblasts of inner and outer medulla) day 0
GSM1219325 http://www.gudmap.org/gudmap/pages/mic_submission.html?id=GUDMAP:21180 kidney pericytes (periarterial fibroblasts of inner and outer medulla) day 0
GSM1219326 http://www.gudmap.org/gudmap/pages/mic_submission.html?id=GUDMAP:21181 kidney pericytes (periarterial fibroblasts of inner and outer medulla) day 0
GSM1219327 http://www.gudmap.org/gudmap/pages/mic_submission.html?id=GUDMAP:21182 kidney medulla day 0
GSM1219328 http://www.gudmap.org/gudmap/pages/mic_submission.html?id=GUDMAP:21183 kidney medulla day 0
GSM1219329 http://www.gudmap.org/gudmap/pages/mic_submission.html?id=GUDMAP:21184 kidney medulla day 0
GSM1219330 http://www.gudmap.org/gudmap/pages/mic_submission.html?id=GUDMAP:21185 kidney pericytes (periarterial fibroblasts of inner and outer medulla) day 2
GSM121933 http://www.gudmap.org/gudmap/pages/mic_submission.html?id=GUDMAP:21186 kidney pericytes (periarterial fibroblasts of inner and outer medulla) day 2
GSM1219332 http://www.gudmap.org/gudmap/pages/mic_submission.html?id=GUDMAP:21187 kidney pericytes (periarterial fibroblasts of inner and outer medulla) day 2
GSM1219333 http://www.gudmap.org/gudmap/pages/mic_submission.html?id=GUDMAP:21188 kidney pericytes (periarterial fibroblasts of inner and outer medulla) day 5
GSM1219334 http://www.gudmap.org/gudmap/pages/mic_submission.html?id=GUDMAP:21189 kidney pericytes (periarterial fibroblasts of inner and outer medulla) day 5
GSM1219335 http://www.gudmap.org/gudmap/pages/mic_submission.html?id=GUDMAP:21190 kidney pericytes (periarterial fibroblasts of inner and outer medulla) day 5
GSM1219336 http://www.gudmap.org/gudmap/pages/mic_submission.html?id=GUDMAP:21191 kidney medulla day 5
GSM1219337 http://www.gudmap.org/gudmap/pages/mic_submission.html?id=GUDMAP:21192 kidney medulla day 5
GSM1219338 http://www.gudmap.org/gudmap/pages/mic_submission.html?id=GUDMAP:21193 kidney medulla day 5

Tags

  • disease
  • kidney
  • kidney disease
  • pericyte
  • protein
  • ureteral obstruction

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