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Home › Dataset Library › Expression data from human response to invasive pneumococcal disease.

Dataset: Expression data from human response to invasive pneumococcal disease.

There is differential expression of genes between cases and controls using microarray analysis, and genes that are crucial for host...

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There is differential expression of genes between cases and controls using microarray analysis, and genes that are crucial for host defence responses are significantly up-regulated in cases during pneumococcal infection. Affymetrix microarray technology was used to compare the levels of mRNA between cases and controls and to evaluate whether this is influenced by underlying HIV cormobidity, and if association with different disease outcomes (death vs. survival) exists.

Species:
human

Samples:
15

Source:
E-GEOD-47172

Updated:
Dec.12, 2014

Registered:
Jun.18, 2014


Factors: (via ArrayExpress)
Sample DISEASE STATE DISEASE OUTCOME HIV STATUS
GSM114602 HIV- case with invasive pneumococcal disease alive HIV-
GSM114602 HIV- case with invasive pneumococcal disease alive HIV-
GSM114602 HIV- case with invasive pneumococcal disease alive HIV-
GSM1146018 HIV+ case with invasive pneumococcal disease alive HIV+
GSM1146018 HIV+ case with invasive pneumococcal disease alive HIV+
GSM1146018 HIV+ case with invasive pneumococcal disease alive HIV+
GSM1146015 HIV- case with invasive pneumococcal disease dead HIV-
GSM1146015 HIV- case with invasive pneumococcal disease dead HIV-
GSM1146015 HIV- case with invasive pneumococcal disease dead HIV-
GSM1146012 HIV+ case with invasive pneumococcal disease dead HIV+
GSM1146012 HIV+ case with invasive pneumococcal disease dead HIV+
GSM1146012 HIV+ case with invasive pneumococcal disease dead HIV+
GSM1146009 healthy control without invasive pneumococcal disease alive HIV-
GSM1146009 healthy control without invasive pneumococcal disease alive HIV-
GSM1146009 healthy control without invasive pneumococcal disease alive HIV-

Tags

  • disease

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