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Home › Dataset Library › Genome-wide differential gene expression signatures in pediatric acute lymphoblastic leukemia subtypes

Dataset: Genome-wide differential gene expression signatures in pediatric acute lymphoblastic leukemia subtypes

We surveyed the genome-wide DNA methylation levels and gene expression patterns in patients with pediatric acute lymphoblastic leukemia....

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We surveyed the genome-wide DNA methylation levels and gene expression patterns in patients with pediatric acute lymphoblastic leukemia. Using Affymetrix U133 Plus 2.0 GeneChips, we identified a relatively small set of CpG sites that are highly correlated with gene expression. Genome-wide expression analysis of 108 primary ALL samples by Affymetrix Human Genome U133 Plus 2.0 GeneChips used to investigate relationships between subtype-specific DNA methylation patterns and gene expression in 93 patients with both gene expression and DNA methylation data.

Species:
human

Samples:
108

Source:
E-GEOD-47051

Updated:
Dec.12, 2014

Registered:
Jul.11, 2014


Factors: (via ArrayExpress)
Sample TUMOR SUBTYPE ORGANISM PART
GSM1143889 t(1;19) bone marrow
GSM1143888 NA Peripheral blood
GSM1143887 undefined bone marrow
GSM1143886 T-ALL Peripheral blood
GSM1143885 T-ALL bone marrow
GSM1143884 t(12;21) bone marrow
GSM1143883 t(12;21) Peripheral blood
GSM1143885 T-ALL bone marrow
GSM1143889 t(1;19) bone marrow
GSM1143887 undefined bone marrow
GSM1143884 t(12;21) bone marrow
GSM1143885 T-ALL bone marrow
GSM1143877 HeH bone marrow
GSM1143885 T-ALL bone marrow
GSM1143875 NA NA
GSM1143885 T-ALL bone marrow
GSM1143873 undefined Peripheral blood
GSM1143877 HeH bone marrow
GSM1143875 NA NA
GSM1143875 NA NA
GSM1143869 11q23/MLL Peripheral blood
GSM1143868 t(9;22) bone marrow
GSM1143877 HeH bone marrow
GSM1143886 T-ALL Peripheral blood
GSM1143865 11q23/MLL bone marrow
GSM1143875 NA NA
GSM1143875 NA NA
GSM1143875 NA NA
GSM1143875 NA NA
GSM1143889 t(1;19) bone marrow
GSM1143885 T-ALL bone marrow
GSM1143884 t(12;21) bone marrow
GSM1143884 t(12;21) bone marrow
GSM1143856 dic(9;20) bone marrow
GSM1143884 t(12;21) bone marrow
GSM1143877 HeH bone marrow
GSM1143853 NA bone marrow
GSM1143856 dic(9;20) bone marrow
GSM1143877 HeH bone marrow
GSM1143885 T-ALL bone marrow
GSM1143877 HeH bone marrow
GSM1143877 HeH bone marrow
GSM1143885 T-ALL bone marrow
GSM1143877 HeH bone marrow
GSM1143853 NA bone marrow
GSM1143885 T-ALL bone marrow
GSM1143877 HeH bone marrow
GSM1143884 t(12;21) bone marrow
GSM1143877 HeH bone marrow
GSM1143885 T-ALL bone marrow
GSM1143889 t(1;19) bone marrow
GSM1143885 T-ALL bone marrow
GSM1143877 HeH bone marrow
GSM1143885 T-ALL bone marrow
GSM1143877 HeH bone marrow
GSM1143885 T-ALL bone marrow
GSM1143884 t(12;21) bone marrow
GSM1143885 T-ALL bone marrow
GSM1143868 t(9;22) bone marrow
GSM1143877 HeH bone marrow
GSM1143853 NA bone marrow
GSM1143887 undefined bone marrow
GSM1143885 T-ALL bone marrow
GSM1143885 T-ALL bone marrow
GSM1143877 HeH bone marrow
GSM1143885 T-ALL bone marrow
GSM1143884 t(12;21) bone marrow
GSM1143885 T-ALL bone marrow
GSM1143856 dic(9;20) bone marrow
GSM1143885 T-ALL bone marrow
GSM1143868 t(9;22) bone marrow
GSM1143889 t(1;19) bone marrow
GSM1143877 HeH bone marrow
GSM1143853 NA bone marrow
GSM1143856 dic(9;20) bone marrow
GSM1143884 t(12;21) bone marrow
GSM1143877 HeH bone marrow
GSM1143887 undefined bone marrow
GSM1143856 dic(9;20) bone marrow
GSM1143884 t(12;21) bone marrow
GSM1143885 T-ALL bone marrow
GSM1143885 T-ALL bone marrow
GSM1143884 t(12;21) bone marrow
GSM1143884 t(12;21) bone marrow
GSM1143869 11q23/MLL Peripheral blood
GSM1143885 T-ALL bone marrow
GSM1143853 NA bone marrow
GSM1143884 t(12;21) bone marrow
GSM1143885 T-ALL bone marrow
GSM1143877 HeH bone marrow
GSM1143886 T-ALL Peripheral blood
GSM1143873 undefined Peripheral blood
GSM1143886 T-ALL Peripheral blood
GSM1143875 NA NA
GSM1143886 T-ALL Peripheral blood
GSM1143868 t(9;22) bone marrow
GSM1143889 t(1;19) bone marrow
GSM1143865 11q23/MLL bone marrow
GSM1143885 T-ALL bone marrow
GSM1143856 dic(9;20) bone marrow
GSM1143883 t(12;21) Peripheral blood
GSM1143886 T-ALL Peripheral blood
GSM1143787 t(9;22) Peripheral blood
GSM1143873 undefined Peripheral blood
GSM1143884 t(12;21) bone marrow
GSM1143865 11q23/MLL bone marrow
GSM1143877 HeH bone marrow
GSM1143875 NA NA

Tags

  • acute lymphoblastic leukemia
  • genome
  • leukemia
  • lymphoblastic leukemia

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