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Home › Dataset Library › IQGAP2 knockout model of hepatocellular carcinoma

Dataset: IQGAP2 knockout model of hepatocellular carcinoma

Whole body knockout mice lacking IQ-motif containing GTPase-activating protein 2 (IQGAP2) develop spontaneous hepatocellular carcinoma...

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Whole body knockout mice lacking IQ-motif containing GTPase-activating protein 2 (IQGAP2) develop spontaneous hepatocellular carcinoma (HCC) at the age of 12 months and older (Schmidt et al., 2008). Hepatic transcript expression profiles were obtained for IQGAP2 knockout and wild-type control mice of two age groups, 6- and 24-month-old. Liver samples from 24-month-old IQGAP2 knockout mice were HCC tumors, livers from all other groups were tumor-free. Results provide insights into the potential role of IQGAP2 as a liver-specific tumor suppressor. Transcript profiles of four groups of mouse livers (N = 3 in each group) were compared using Affymetrix GeneChip® Mouse Genome 430 2.0 Array. The groups included livers from 6- and 24-month-old wild-type (WT) mice and 6- and 24-month-old (KO) Iqgap2-/- mice.

Species:
mouse

Samples:
12

Source:
E-GEOD-46646

Updated:
Dec.12, 2014

Registered:
Nov.12, 2014


Factors: (via ArrayExpress)
Sample AGE GENOTYPE ORGANISM PART
GSM1133576 6 months IQGAP2 knockout normal liver
GSM1133576 6 months IQGAP2 knockout normal liver
GSM1133576 6 months IQGAP2 knockout normal liver
GSM1133579 24 months IQGAP2 knockout hepatocellular carcinoma (HCC) tumor
GSM1133579 24 months IQGAP2 knockout hepatocellular carcinoma (HCC) tumor
GSM1133579 24 months IQGAP2 knockout hepatocellular carcinoma (HCC) tumor
GSM1133582 6 months wild-type normal liver
GSM1133582 6 months wild-type normal liver
GSM1133582 6 months wild-type normal liver
GSM1133585 24 months wild-type normal liver
GSM1133585 24 months wild-type normal liver
GSM1133585 24 months wild-type normal liver

Tags

  • body
  • carcinoma
  • genome
  • hepatocellular carcinoma
  • liver
  • protein

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