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Home › Dataset Library › The Plasma Cell Signature in Autoimmune Disease (II)

Dataset: The Plasma Cell Signature in Autoimmune Disease (II)

Objective: Production of pathogenic autoantibodies by self-reactive plasma cells (PC) is a hallmark of autoimmune diseases. Investigating...

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Objective: Production of pathogenic autoantibodies by self-reactive plasma cells (PC) is a hallmark of autoimmune diseases. Investigating the prevalence of PC in autoimmune disease and their relationship with known pathogenic pathways may increase our understanding of the role of PC in disease progression and treatment response. Methods: We developed a sensitive gene expression based method to overcome the challenges of measuring PC using flow cytometry. Whole genome microarray analysis of sorted cellular fractions identified a panel of genes, IGHA, IGJ, IGKC, IGKV, and TNFRSF17, expressed predominantly in PC. The sensitivity of the PC signature score created from the combined expression levels of these genes was assessed through ex vivo experiments with sorted cells. This PC gene expression signature was used for monitoring changes in PC levels following anti-CD19 therapy; evaluating the relationship between PC and other autoimmune disease-related genes; and estimating PC levels in affected blood and tissue from multiple autoimmune diseases. Results: The PC signature was highly sensitive and capable of detecting as few as 300 PCs. The PC signature was reduced over 90% in scleroderma patients following anti-CD19 treatment and this reduction was highly correlated (r = 0.77) with inhibition of collagen gene expression. Evaluation of multiple autoimmune diseases revealed 30-35% of lupus, rheumatoid arthritis, and scleroderma patients with increased PC levels. Conclusion: This newly developed PC signature provides a robust and accurate method to measure PC levels in the clinic. Our results highlight subsets of patients across multiple autoimmune diseases that may benefit from PC depleting therapy. MI-CP200 is a Phase 1, randomized, double-blind, placebo-controlled study to evaluate the safety and tolerability of escalating single IV doses of MEDI-551 in adult subjects with scleroderma. In this study, 5 cohorts of subjects (n=25) received 1 of 5 single IV doses of MEDI-551 (0.1, 0.3, 1.0, 3.0, or 10.0 mg/kg) or placebo. Twenty-four healthy donor control samples are also included.

Species:
human

Samples:
123

Source:
E-GEOD-45536

Updated:
Dec.12, 2014

Registered:
Jul.12, 2014


Factors: (via ArrayExpress)
Sample TIME TREATMENT PHENOTYPE
GSM1108272 Day 85 10.0 mpk MEDI-551 scleroderma subject
GSM110827 Day 29 10.0 mpk MEDI-551 scleroderma subject
GSM1108270 Day 3 10.0 mpk MEDI-551 scleroderma subject
GSM1108269 Day 1 (pre-dose) 10.0 mpk MEDI-551 scleroderma subject
GSM1108272 Day 85 10.0 mpk MEDI-551 scleroderma subject
GSM110827 Day 29 10.0 mpk MEDI-551 scleroderma subject
GSM1108270 Day 3 10.0 mpk MEDI-551 scleroderma subject
GSM1108269 Day 1 (pre-dose) 10.0 mpk MEDI-551 scleroderma subject
GSM1108264 Day 85 placebo scleroderma subject
GSM1108263 Day 29 placebo scleroderma subject
GSM1108262 Day 3 placebo scleroderma subject
GSM110826 Day 1 (pre-dose) placebo scleroderma subject
GSM1108272 Day 85 10.0 mpk MEDI-551 scleroderma subject
GSM110827 Day 29 10.0 mpk MEDI-551 scleroderma subject
GSM1108270 Day 3 10.0 mpk MEDI-551 scleroderma subject
GSM1108269 Day 1 (pre-dose) 10.0 mpk MEDI-551 scleroderma subject
GSM1108272 Day 85 10.0 mpk MEDI-551 scleroderma subject
GSM110827 Day 29 10.0 mpk MEDI-551 scleroderma subject
GSM1108270 Day 3 10.0 mpk MEDI-551 scleroderma subject
GSM1108269 Day 1 (pre-dose) 10.0 mpk MEDI-551 scleroderma subject
GSM1108272 Day 85 10.0 mpk MEDI-551 scleroderma subject
GSM110827 Day 29 10.0 mpk MEDI-551 scleroderma subject
GSM1108270 Day 3 10.0 mpk MEDI-551 scleroderma subject
GSM1108269 Day 1 (pre-dose) 10.0 mpk MEDI-551 scleroderma subject
GSM1108272 Day 85 10.0 mpk MEDI-551 scleroderma subject
GSM110827 Day 29 10.0 mpk MEDI-551 scleroderma subject
GSM1108270 Day 3 10.0 mpk MEDI-551 scleroderma subject
GSM1108269 Day 1 (pre-dose) 10.0 mpk MEDI-551 scleroderma subject
GSM1108264 Day 85 placebo scleroderma subject
GSM1108263 Day 29 placebo scleroderma subject
GSM1108262 Day 3 placebo scleroderma subject
GSM110826 Day 1 (pre-dose) placebo scleroderma subject
GSM1108240 Day 85 3.0 mpk MEDI-551 scleroderma subject
GSM1108239 Day 29 3.0 mpk MEDI-551 scleroderma subject
GSM1108238 Day 3 3.0 mpk MEDI-551 scleroderma subject
GSM1108237 Day 1 (pre-dose) 3.0 mpk MEDI-551 scleroderma subject
GSM1108240 Day 85 3.0 mpk MEDI-551 scleroderma subject
GSM1108239 Day 29 3.0 mpk MEDI-551 scleroderma subject
GSM1108238 Day 3 3.0 mpk MEDI-551 scleroderma subject
GSM1108237 Day 1 (pre-dose) 3.0 mpk MEDI-551 scleroderma subject
GSM1108240 Day 85 3.0 mpk MEDI-551 scleroderma subject
GSM1108239 Day 29 3.0 mpk MEDI-551 scleroderma subject
GSM1108238 Day 3 3.0 mpk MEDI-551 scleroderma subject
GSM1108237 Day 1 (pre-dose) 3.0 mpk MEDI-551 scleroderma subject
GSM1108239 Day 29 3.0 mpk MEDI-551 scleroderma subject
GSM1108238 Day 3 3.0 mpk MEDI-551 scleroderma subject
GSM1108237 Day 1 (pre-dose) 3.0 mpk MEDI-551 scleroderma subject
GSM1108264 Day 85 placebo scleroderma subject
GSM1108263 Day 29 placebo scleroderma subject
GSM1108262 Day 3 placebo scleroderma subject
GSM110826 Day 1 (pre-dose) placebo scleroderma subject
GSM110822 Day 85 1.0 mpk MEDI-551 scleroderma subject
GSM1108220 Day 29 1.0 mpk MEDI-551 scleroderma subject
GSM1108219 Day 3 1.0 mpk MEDI-551 scleroderma subject
GSM1108218 Day 1 (pre-dose) 1.0 mpk MEDI-551 scleroderma subject
GSM110822 Day 85 1.0 mpk MEDI-551 scleroderma subject
GSM1108220 Day 29 1.0 mpk MEDI-551 scleroderma subject
GSM1108219 Day 3 1.0 mpk MEDI-551 scleroderma subject
GSM1108218 Day 1 (pre-dose) 1.0 mpk MEDI-551 scleroderma subject
GSM110822 Day 85 1.0 mpk MEDI-551 scleroderma subject
GSM1108220 Day 29 1.0 mpk MEDI-551 scleroderma subject
GSM1108219 Day 3 1.0 mpk MEDI-551 scleroderma subject
GSM1108218 Day 1 (pre-dose) 1.0 mpk MEDI-551 scleroderma subject
GSM110822 Day 85 1.0 mpk MEDI-551 scleroderma subject
GSM1108220 Day 29 1.0 mpk MEDI-551 scleroderma subject
GSM1108219 Day 3 1.0 mpk MEDI-551 scleroderma subject
GSM1108218 Day 1 (pre-dose) 1.0 mpk MEDI-551 scleroderma subject
GSM110822 Day 85 1.0 mpk MEDI-551 scleroderma subject
GSM1108220 Day 29 1.0 mpk MEDI-551 scleroderma subject
GSM1108219 Day 3 1.0 mpk MEDI-551 scleroderma subject
GSM1108218 Day 1 (pre-dose) 1.0 mpk MEDI-551 scleroderma subject
GSM110822 Day 85 1.0 mpk MEDI-551 scleroderma subject
GSM1108220 Day 29 1.0 mpk MEDI-551 scleroderma subject
GSM1108219 Day 3 1.0 mpk MEDI-551 scleroderma subject
GSM1108218 Day 1 (pre-dose) 1.0 mpk MEDI-551 scleroderma subject
GSM1108197 Day 85 0.3 mpk MEDI-551 scleroderma subject
GSM1108196 Day 29 0.3 mpk MEDI-551 scleroderma subject
GSM1108195 Day 3 0.3 mpk MEDI-551 scleroderma subject
GSM1108194 Day 1 (pre-dose) 0.3 mpk MEDI-551 scleroderma subject
GSM1108197 Day 85 0.3 mpk MEDI-551 scleroderma subject
GSM1108196 Day 29 0.3 mpk MEDI-551 scleroderma subject
GSM1108195 Day 3 0.3 mpk MEDI-551 scleroderma subject
GSM1108194 Day 1 (pre-dose) 0.3 mpk MEDI-551 scleroderma subject
GSM1108197 Day 85 0.3 mpk MEDI-551 scleroderma subject
GSM1108196 Day 29 0.3 mpk MEDI-551 scleroderma subject
GSM1108195 Day 3 0.3 mpk MEDI-551 scleroderma subject
GSM1108194 Day 1 (pre-dose) 0.3 mpk MEDI-551 scleroderma subject
GSM1108197 Day 85 0.3 mpk MEDI-551 scleroderma subject
GSM1108196 Day 29 0.3 mpk MEDI-551 scleroderma subject
GSM1108195 Day 3 0.3 mpk MEDI-551 scleroderma subject
GSM1108194 Day 1 (pre-dose) 0.3 mpk MEDI-551 scleroderma subject
GSM1108264 Day 85 placebo scleroderma subject
GSM1108263 Day 29 placebo scleroderma subject
GSM1108262 Day 3 placebo scleroderma subject
GSM110826 Day 1 (pre-dose) placebo scleroderma subject
GSM1108177 Day 85 0.1 mpk MEDI-551 scleroderma subject
GSM1108176 Day 29 0.1 mpk MEDI-551 scleroderma subject
GSM1108175 Day 3 0.1 mpk MEDI-551 scleroderma subject
GSM1108174 Day 1 (pre-dose) 0.1 mpk MEDI-551 scleroderma subject
GSM1108173 NA NA healthy donor
GSM1108173 NA NA healthy donor
GSM1108173 NA NA healthy donor
GSM1108173 NA NA healthy donor
GSM1108173 NA NA healthy donor
GSM1108173 NA NA healthy donor
GSM1108173 NA NA healthy donor
GSM1108173 NA NA healthy donor
GSM1108173 NA NA healthy donor
GSM1108173 NA NA healthy donor
GSM1108173 NA NA healthy donor
GSM1108173 NA NA healthy donor
GSM1108173 NA NA healthy donor
GSM1108173 NA NA healthy donor
GSM1108173 NA NA healthy donor
GSM1108173 NA NA healthy donor
GSM1108173 NA NA healthy donor
GSM1108173 NA NA healthy donor
GSM1108173 NA NA healthy donor
GSM1108173 NA NA healthy donor
GSM1108173 NA NA healthy donor
GSM1108173 NA NA healthy donor
GSM1108173 NA NA healthy donor
GSM1108173 NA NA healthy donor

Tags

  • arthritis
  • autoimmune disease
  • collagen
  • disease
  • genome
  • lupus
  • rheumatoid arthritis
  • scleroderma

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