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Home › Dataset Library › The Plasma Cell Signature in Autoimmune Disease (II)

Dataset: The Plasma Cell Signature in Autoimmune Disease (II)

Objective: Production of pathogenic autoantibodies by self-reactive plasma cells (PC) is a hallmark of autoimmune diseases. Investigating...

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Objective: Production of pathogenic autoantibodies by self-reactive plasma cells (PC) is a hallmark of autoimmune diseases. Investigating the prevalence of PC in autoimmune disease and their relationship with known pathogenic pathways may increase our understanding of the role of PC in disease progression and treatment response. Methods: We developed a sensitive gene expression based method to overcome the challenges of measuring PC using flow cytometry. Whole genome microarray analysis of sorted cellular fractions identified a panel of genes, IGHA, IGJ, IGKC, IGKV, and TNFRSF17, expressed predominantly in PC. The sensitivity of the PC signature score created from the combined expression levels of these genes was assessed through ex vivo experiments with sorted cells. This PC gene expression signature was used for monitoring changes in PC levels following anti-CD19 therapy; evaluating the relationship between PC and other autoimmune disease-related genes; and estimating PC levels in affected blood and tissue from multiple autoimmune diseases. Results: The PC signature was highly sensitive and capable of detecting as few as 300 PCs. The PC signature was reduced over 90% in scleroderma patients following anti-CD19 treatment and this reduction was highly correlated (r = 0.77) with inhibition of collagen gene expression. Evaluation of multiple autoimmune diseases revealed 30-35% of lupus, rheumatoid arthritis, and scleroderma patients with increased PC levels. Conclusion: This newly developed PC signature provides a robust and accurate method to measure PC levels in the clinic. Our results highlight subsets of patients across multiple autoimmune diseases that may benefit from PC depleting therapy. MI-CP200 is a Phase 1, randomized, double-blind, placebo-controlled study to evaluate the safety and tolerability of escalating single IV doses of MEDI-551 in adult subjects with scleroderma. In this study, 5 cohorts of subjects (n=25) received 1 of 5 single IV doses of MEDI-551 (0.1, 0.3, 1.0, 3.0, or 10.0 mg/kg) or placebo. Twenty-four healthy donor control samples are also included.

Species:
human

Samples:
123

Source:
E-GEOD-45536

Updated:
Dec.12, 2014

Registered:
Jul.12, 2014


Factors: (via ArrayExpress)
Sample TREATMENT PHENOTYPE TIME
GSM1108272 10.0 mpk MEDI-551 scleroderma subject Day 85
GSM110827 10.0 mpk MEDI-551 scleroderma subject Day 29
GSM1108270 10.0 mpk MEDI-551 scleroderma subject Day 3
GSM1108269 10.0 mpk MEDI-551 scleroderma subject Day 1 (pre-dose)
GSM1108272 10.0 mpk MEDI-551 scleroderma subject Day 85
GSM110827 10.0 mpk MEDI-551 scleroderma subject Day 29
GSM1108270 10.0 mpk MEDI-551 scleroderma subject Day 3
GSM1108269 10.0 mpk MEDI-551 scleroderma subject Day 1 (pre-dose)
GSM1108264 placebo scleroderma subject Day 85
GSM1108263 placebo scleroderma subject Day 29
GSM1108262 placebo scleroderma subject Day 3
GSM110826 placebo scleroderma subject Day 1 (pre-dose)
GSM1108272 10.0 mpk MEDI-551 scleroderma subject Day 85
GSM110827 10.0 mpk MEDI-551 scleroderma subject Day 29
GSM1108270 10.0 mpk MEDI-551 scleroderma subject Day 3
GSM1108269 10.0 mpk MEDI-551 scleroderma subject Day 1 (pre-dose)
GSM1108272 10.0 mpk MEDI-551 scleroderma subject Day 85
GSM110827 10.0 mpk MEDI-551 scleroderma subject Day 29
GSM1108270 10.0 mpk MEDI-551 scleroderma subject Day 3
GSM1108269 10.0 mpk MEDI-551 scleroderma subject Day 1 (pre-dose)
GSM1108272 10.0 mpk MEDI-551 scleroderma subject Day 85
GSM110827 10.0 mpk MEDI-551 scleroderma subject Day 29
GSM1108270 10.0 mpk MEDI-551 scleroderma subject Day 3
GSM1108269 10.0 mpk MEDI-551 scleroderma subject Day 1 (pre-dose)
GSM1108272 10.0 mpk MEDI-551 scleroderma subject Day 85
GSM110827 10.0 mpk MEDI-551 scleroderma subject Day 29
GSM1108270 10.0 mpk MEDI-551 scleroderma subject Day 3
GSM1108269 10.0 mpk MEDI-551 scleroderma subject Day 1 (pre-dose)
GSM1108264 placebo scleroderma subject Day 85
GSM1108263 placebo scleroderma subject Day 29
GSM1108262 placebo scleroderma subject Day 3
GSM110826 placebo scleroderma subject Day 1 (pre-dose)
GSM1108240 3.0 mpk MEDI-551 scleroderma subject Day 85
GSM1108239 3.0 mpk MEDI-551 scleroderma subject Day 29
GSM1108238 3.0 mpk MEDI-551 scleroderma subject Day 3
GSM1108237 3.0 mpk MEDI-551 scleroderma subject Day 1 (pre-dose)
GSM1108240 3.0 mpk MEDI-551 scleroderma subject Day 85
GSM1108239 3.0 mpk MEDI-551 scleroderma subject Day 29
GSM1108238 3.0 mpk MEDI-551 scleroderma subject Day 3
GSM1108237 3.0 mpk MEDI-551 scleroderma subject Day 1 (pre-dose)
GSM1108240 3.0 mpk MEDI-551 scleroderma subject Day 85
GSM1108239 3.0 mpk MEDI-551 scleroderma subject Day 29
GSM1108238 3.0 mpk MEDI-551 scleroderma subject Day 3
GSM1108237 3.0 mpk MEDI-551 scleroderma subject Day 1 (pre-dose)
GSM1108239 3.0 mpk MEDI-551 scleroderma subject Day 29
GSM1108238 3.0 mpk MEDI-551 scleroderma subject Day 3
GSM1108237 3.0 mpk MEDI-551 scleroderma subject Day 1 (pre-dose)
GSM1108264 placebo scleroderma subject Day 85
GSM1108263 placebo scleroderma subject Day 29
GSM1108262 placebo scleroderma subject Day 3
GSM110826 placebo scleroderma subject Day 1 (pre-dose)
GSM110822 1.0 mpk MEDI-551 scleroderma subject Day 85
GSM1108220 1.0 mpk MEDI-551 scleroderma subject Day 29
GSM1108219 1.0 mpk MEDI-551 scleroderma subject Day 3
GSM1108218 1.0 mpk MEDI-551 scleroderma subject Day 1 (pre-dose)
GSM110822 1.0 mpk MEDI-551 scleroderma subject Day 85
GSM1108220 1.0 mpk MEDI-551 scleroderma subject Day 29
GSM1108219 1.0 mpk MEDI-551 scleroderma subject Day 3
GSM1108218 1.0 mpk MEDI-551 scleroderma subject Day 1 (pre-dose)
GSM110822 1.0 mpk MEDI-551 scleroderma subject Day 85
GSM1108220 1.0 mpk MEDI-551 scleroderma subject Day 29
GSM1108219 1.0 mpk MEDI-551 scleroderma subject Day 3
GSM1108218 1.0 mpk MEDI-551 scleroderma subject Day 1 (pre-dose)
GSM110822 1.0 mpk MEDI-551 scleroderma subject Day 85
GSM1108220 1.0 mpk MEDI-551 scleroderma subject Day 29
GSM1108219 1.0 mpk MEDI-551 scleroderma subject Day 3
GSM1108218 1.0 mpk MEDI-551 scleroderma subject Day 1 (pre-dose)
GSM110822 1.0 mpk MEDI-551 scleroderma subject Day 85
GSM1108220 1.0 mpk MEDI-551 scleroderma subject Day 29
GSM1108219 1.0 mpk MEDI-551 scleroderma subject Day 3
GSM1108218 1.0 mpk MEDI-551 scleroderma subject Day 1 (pre-dose)
GSM110822 1.0 mpk MEDI-551 scleroderma subject Day 85
GSM1108220 1.0 mpk MEDI-551 scleroderma subject Day 29
GSM1108219 1.0 mpk MEDI-551 scleroderma subject Day 3
GSM1108218 1.0 mpk MEDI-551 scleroderma subject Day 1 (pre-dose)
GSM1108197 0.3 mpk MEDI-551 scleroderma subject Day 85
GSM1108196 0.3 mpk MEDI-551 scleroderma subject Day 29
GSM1108195 0.3 mpk MEDI-551 scleroderma subject Day 3
GSM1108194 0.3 mpk MEDI-551 scleroderma subject Day 1 (pre-dose)
GSM1108197 0.3 mpk MEDI-551 scleroderma subject Day 85
GSM1108196 0.3 mpk MEDI-551 scleroderma subject Day 29
GSM1108195 0.3 mpk MEDI-551 scleroderma subject Day 3
GSM1108194 0.3 mpk MEDI-551 scleroderma subject Day 1 (pre-dose)
GSM1108197 0.3 mpk MEDI-551 scleroderma subject Day 85
GSM1108196 0.3 mpk MEDI-551 scleroderma subject Day 29
GSM1108195 0.3 mpk MEDI-551 scleroderma subject Day 3
GSM1108194 0.3 mpk MEDI-551 scleroderma subject Day 1 (pre-dose)
GSM1108197 0.3 mpk MEDI-551 scleroderma subject Day 85
GSM1108196 0.3 mpk MEDI-551 scleroderma subject Day 29
GSM1108195 0.3 mpk MEDI-551 scleroderma subject Day 3
GSM1108194 0.3 mpk MEDI-551 scleroderma subject Day 1 (pre-dose)
GSM1108264 placebo scleroderma subject Day 85
GSM1108263 placebo scleroderma subject Day 29
GSM1108262 placebo scleroderma subject Day 3
GSM110826 placebo scleroderma subject Day 1 (pre-dose)
GSM1108177 0.1 mpk MEDI-551 scleroderma subject Day 85
GSM1108176 0.1 mpk MEDI-551 scleroderma subject Day 29
GSM1108175 0.1 mpk MEDI-551 scleroderma subject Day 3
GSM1108174 0.1 mpk MEDI-551 scleroderma subject Day 1 (pre-dose)
GSM1108173 NA healthy donor NA
GSM1108173 NA healthy donor NA
GSM1108173 NA healthy donor NA
GSM1108173 NA healthy donor NA
GSM1108173 NA healthy donor NA
GSM1108173 NA healthy donor NA
GSM1108173 NA healthy donor NA
GSM1108173 NA healthy donor NA
GSM1108173 NA healthy donor NA
GSM1108173 NA healthy donor NA
GSM1108173 NA healthy donor NA
GSM1108173 NA healthy donor NA
GSM1108173 NA healthy donor NA
GSM1108173 NA healthy donor NA
GSM1108173 NA healthy donor NA
GSM1108173 NA healthy donor NA
GSM1108173 NA healthy donor NA
GSM1108173 NA healthy donor NA
GSM1108173 NA healthy donor NA
GSM1108173 NA healthy donor NA
GSM1108173 NA healthy donor NA
GSM1108173 NA healthy donor NA
GSM1108173 NA healthy donor NA
GSM1108173 NA healthy donor NA

Tags

  • arthritis
  • autoimmune disease
  • collagen
  • disease
  • genome
  • lupus
  • rheumatoid arthritis
  • scleroderma

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