Dataset: Expression data from MYCN transgenic mice
TH-MYCN transgenic (Tg) mice are the model for neuroblastoma. One of the sympathetic ganglia is the origin of neuroblastoma in those...
TH-MYCN transgenic (Tg) mice are the model for neuroblastoma. One of the sympathetic ganglia is the origin of neuroblastoma in those mice. The tumor incidences of homozygotes and hemizygotes are 100% and 70-80%, respectively. The involvement of midkine (Mdk), a tumor-related growth factor, was also examined by knockout mice. Ganglia and tumor tissues were dissected from several genotypes of mice (MYCN Tg homozygote and hemizygote, knockout (KO) of Mdk gene). In some of cases, we cultured neurosphere and tumorsphere. The mRNA extracted from those samples were subjected to Affymetrix microarrays.
- Species:
- mouse
- Samples:
- 20
- Source:
- E-GEOD-43419
- Updated:
- Dec.12, 2014
- Registered:
- Nov.12, 2014
Factors:
(via ArrayExpress)
| Sample | GENOTYPE | ORGANISM PART | GENETIC BACKGROUND |
|---|---|---|---|
| GSM1062270 | MYCN Tg homozygote | tumor tissue | mixed 129+Ter/SvJcl |
| GSM1062270 | MYCN Tg homozygote | tumor tissue | mixed 129+Ter/SvJcl |
| GSM1062272 | MYCN Tg homozygote + Mdk KO | tumor tissue | mixed 129+Ter/SvJcl |
| GSM1062272 | MYCN Tg homozygote + Mdk KO | tumor tissue | mixed 129+Ter/SvJcl |
| GSM1062274 | wild type | ganglion | 129+Ter/SvJcl |
| GSM1062274 | wild type | ganglion | 129+Ter/SvJcl |
| GSM1062276 | MYCN Tg homozygote | ganglion | mixed 129+Ter/SvJcl |
| GSM1062276 | MYCN Tg homozygote | ganglion | mixed 129+Ter/SvJcl |
| GSM1062278 | MYCN Tg hemizygote | tumor tissue | mixed 129+Ter/SvJcl |
| GSM1062278 | MYCN Tg hemizygote | tumor tissue | mixed 129+Ter/SvJcl |
| GSM1062270 | MYCN Tg homozygote | tumor tissue | mixed 129+Ter/SvJcl |
| GSM1062270 | MYCN Tg homozygote | tumor tissue | mixed 129+Ter/SvJcl |
| GSM1062274 | wild type | ganglion | 129+Ter/SvJcl |
| GSM1062274 | wild type | ganglion | 129+Ter/SvJcl |
| GSM1062284 | wild type | neurosphere | 129+Ter/SvJcl |
| GSM1062284 | wild type | neurosphere | 129+Ter/SvJcl |
| GSM1062278 | MYCN Tg hemizygote | tumor tissue | mixed 129+Ter/SvJcl |
| GSM1062278 | MYCN Tg hemizygote | tumor tissue | mixed 129+Ter/SvJcl |
| GSM1062288 | MYCN Tg hemizygote | tumorsphere | mixed 129+Ter/SvJcl |
| GSM1062288 | MYCN Tg hemizygote | tumorsphere | mixed 129+Ter/SvJcl |