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Home › Dataset Library › Expression data from CD11c+ mDCs in HIV infection

Dataset: Expression data from CD11c+ mDCs in HIV infection

CD11c+ Myeloid Dendritic Cells (mDCs) were isolated from the peripheral blood mononuclear cells (PBMCs) of HIV uninfected and HIV...

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CD11c+ Myeloid Dendritic Cells (mDCs) were isolated from the peripheral blood mononuclear cells (PBMCs) of HIV uninfected and HIV infected subjects. The expression of CD11c+ mDCs was accessed to determine how HIV infection may play a role on the expression profiles of these cells. mDCs are known to play a role in antigen presentation, and thus are pivotal in immune sensing and priming of the adaptive immune response. We wanted to see if the change in immune system function during chronic HIV infection may be due to defects in this cell subtype. We used microarray analysis to detail the global program of gene expression underlying changes in mDC function during HIV infection. PBMCs were isolated from HIV uninfected and HIV infected blood samples. CD11c+ cells were sorted from the whole PBMC population by magnetic bead sorting (anti-CD11c antibody bound to a magnetic bead inclubated with whole PBMCs). RNA was isolated from this sorted population to get the gene expression of this subtype of cells.

Species:
human

Samples:
8

Source:
E-GEOD-42058

Updated:
Dec.12, 2014

Registered:
Jul.12, 2014


Factors: (via ArrayExpress)
Sample VIRAL LOAD AGE CD4 COUNT
GSM1031692 15485 42 637
GSM103169 19807 45 218
GSM1031690 976464 45 84
GSM1031689 576620 58 234
GSM1031688 not specified 57 380
GSM1031687 not specified 36 1559
GSM1031686 not specified 43 1021
GSM1031685 not specified 52 730

Tags

  • cell
  • dendritic
  • hiv infection
  • immune system
  • peripheral

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