Dataset: Data expression in alveolar macrophages induced by lipopolysaccharide in humans
Rationale: Lipopolysaccharide (LPS) is ubiquitous in the environment. Inhalation of LPS has been implicated in the pathogenesis and/or...
Rationale: Lipopolysaccharide (LPS) is ubiquitous in the environment. Inhalation of LPS has been implicated in the pathogenesis and/or severity of several lung diseases, including pneumonia, chronic obstructive pulmonary disease and asthma. Alveolar macrophages are the main resident leukocytes exposed to inhaled antigens. Objectives: To obtain insight into which innate immune pathways become activated within human alveolar macrophages upon exposure to LPS in vivo. In seven healthy humans sterile saline was instilled into a lung segment by bronchoscope, followed by instillation of LPS into the contralateral lung. Six hours later a bilateral bronchoalveolar lavage was performed and whole-genome transcriptional profiling was done (Affymetrix HG-U133 Plus 2.0) on purified alveolar macrophages, comparing cells exposed to saline or LPS from the same individuals.
- Species:
- human
- Samples:
- 14
- Source:
- E-GEOD-40885
- PubMed:
- 22952057
- Updated:
- Dec.12, 2014
- Registered:
- Sep.19, 2014
Sample | INDIVIDUAL | TREATMENT |
---|---|---|
GSM100410 | Subject 1 | saline |
GSM1004102 | Subject 1 | LPS |
GSM1004103 | Subject 2 | saline |
GSM1004104 | Subject 2 | LPS |
GSM1004105 | Subject 3 | saline |
GSM1004106 | Subject 3 | LPS |
GSM1004107 | Subject 4 | saline |
GSM1004108 | Subject 4 | LPS |
GSM1004109 | Subject 5 | saline |
GSM1004110 | Subject 5 | LPS |
GSM1004 | Subject 6 | saline |
GSM1004112 | Subject 6 | LPS |
GSM1004113 | Subject 7 | saline |
GSM1004114 | Subject 7 | LPS |