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Home › Dataset Library › Data expression in alveolar macrophages induced by lipopolysaccharide in humans

Dataset: Data expression in alveolar macrophages induced by lipopolysaccharide in humans

Rationale: Lipopolysaccharide (LPS) is ubiquitous in the environment. Inhalation of LPS has been implicated in the pathogenesis and/or...

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Rationale: Lipopolysaccharide (LPS) is ubiquitous in the environment. Inhalation of LPS has been implicated in the pathogenesis and/or severity of several lung diseases, including pneumonia, chronic obstructive pulmonary disease and asthma. Alveolar macrophages are the main resident leukocytes exposed to inhaled antigens. Objectives: To obtain insight into which innate immune pathways become activated within human alveolar macrophages upon exposure to LPS in vivo. In seven healthy humans sterile saline was instilled into a lung segment by bronchoscope, followed by instillation of LPS into the contralateral lung. Six hours later a bilateral bronchoalveolar lavage was performed and whole-genome transcriptional profiling was done (Affymetrix HG-U133 Plus 2.0) on purified alveolar macrophages, comparing cells exposed to saline or LPS from the same individuals.

Species:
human

Samples:
14

Source:
E-GEOD-40885

PubMed:
22952057

Updated:
Dec.12, 2014

Registered:
Sep.19, 2014


Factors: (via ArrayExpress)
Sample INDIVIDUAL TREATMENT
GSM100410 Subject 1 saline
GSM1004102 Subject 1 LPS
GSM1004103 Subject 2 saline
GSM1004104 Subject 2 LPS
GSM1004105 Subject 3 saline
GSM1004106 Subject 3 LPS
GSM1004107 Subject 4 saline
GSM1004108 Subject 4 LPS
GSM1004109 Subject 5 saline
GSM1004110 Subject 5 LPS
GSM1004 Subject 6 saline
GSM1004112 Subject 6 LPS
GSM1004113 Subject 7 saline
GSM1004114 Subject 7 LPS

Tags

  • asthma
  • chronic obstructive pulmonary disease
  • disease
  • genome
  • lipopolysaccharide
  • lung
  • pneumonia

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