BioGPS
  • Home
  • Help
  • Plugins
  • Datasets
  • Sign Up
  • Login
Examples: Gene Symbol(s), Gene Ontology, Splicing plugins, Melanoma datasets
advanced
Home › Dataset Library › Expression data of human induced pluripotent stem cells (hiPSCs), human embryonic stem cells (hESCs) and those differentiated cells.

Dataset: Expression data of human induced pluripotent stem cells (hiPSCs), human embryonic stem cells (hESCs) and those differentiated cells.

We examined hiPSCs, hESCs and those differentiated cells to identify pluripotent signature genes, differentiation marker genes and...

Registered by ArrayExpress Uploader
View Dataset

We examined hiPSCs, hESCs and those differentiated cells to identify pluripotent signature genes, differentiation marker genes and relationship between expression and phenotypes. Additionally, we performed microarray experiments to examine gene expression in human tissues. This data was used for comparison with hESCs, hiPSCs and those differentiated cells. A total of 22 tissues (bone marrow, cerebellum, colon, cortex, fetal brain, heart, kidney, liver, lung, pancreas, prostate, salivary gland, skeletal muscle, small intestine, spinal cord, spleen, stomach, testes, thymus, thyroid, trachea and uterus) were examined. The hiPSCs, hESCs and those differentiated cells were cultured, and their cDNAs were used for microarray analysis. Total RNA isolated from cultivated cells and human tissues were labeled and hybridized to the GeneChip Human Genome U133 Plus 2.0 Array according to the manufacturer's protocol.

Species:
human

Samples:
77

Source:
E-GEOD-39144

Updated:
Dec.12, 2014

Registered:
Sep.19, 2014


Factors: (via ArrayExpress)
Sample SEX CULTURE DAYS CELL LINE CELL TYPE SOURCE
GSM956840 female P27 KhES1 not specified derived from inner cell mass of Japanese blastocysts
GSM95684 female P27 KhES2 not specified derived from inner cell mass of Japanese blastocysts
GSM956842 male P26 KhES3 not specified derived from inner cell mass of Japanese blastocysts
GSM956843 female P18 201B6 not specified induced from human dermal fibroblast of 36-year-old Caucasian female
GSM956844 female P18 201B7 not specified induced from human dermal fibroblast of 36-year-old Caucasian female
GSM956845 female P18 253G1 not specified induced from human dermal fibroblast of 36-year-old Caucasian female
GSM956846 female P15 253G4 not specified induced from human dermal fibroblast of 36-year-old Caucasian female
GSM956847 female P22 409B2 not specified induced from human dermal fibroblast of 36-year-old Caucasian female
GSM956848 female P29 414C2 not specified induced from human dermal fibroblast of 36-year-old Caucasian female
GSM956849 female 30 days from differentiation KhES1 not specified differentiated from KhES1 ES
GSM956850 female 30 days from differentiation KhES2 not specified differentiated from KhES2 ES
GSM95685 male 30 days from differentiation KhES3 not specified differentiated from KhES3 ES
GSM956852 female 30 days from differentiation 201B6 not specified differentiated from 201B6 iPS
GSM956853 female 30 days from differentiation 201B7 not specified differentiated from 201B7 iPS
GSM956854 female 30 days from differentiation 253G1 not specified differentiated from 253G1 iPS
GSM956855 female 30 days from differentiation 253G4 not specified differentiated from 253G4 iPS
GSM956856 female 30 days from differentiation 409B2 not specified differentiated from 409B2 iPS
GSM956857 female 30 days from differentiation 414C2 not specified differentiated from 414C2 iPS
GSM956858 female 42 days from differentiation KhES1 not specified differentiated from KhES1 ES
GSM956859 female 42 days from differentiation KhES2 not specified differentiated from KhES2 ES
GSM956860 female 42 days from differentiation 201B7 not specified differentiated from 201B7 iPS
GSM95686 female 42 days from differentiation 253G1 not specified differentiated from 253G1 iPS
GSM956862 female 42 days from differentiation 253G4 not specified differentiated from 253G4 iPS
GSM956863 female 42 days from differentiation 409B2 not specified differentiated from 409B2 iPS
GSM956864 female 42 days from differentiation 414C2 not specified differentiated from 414C2 iPS
GSM956865 female 66 days from differentiation KhES1 not specified differentiated from KhES1 ES
GSM956866 female 66 days from differentiation KhES2 not specified differentiated from KhES2 ES
GSM956867 female 66 days from differentiation 201B7 not specified differentiated from 201B7 iPS
GSM956868 female 66 days from differentiation 253G1 not specified differentiated from 253G1 iPS
GSM956869 female 66 days from differentiation 253G4 not specified differentiated from 253G4 iPS
GSM956870 female 66 days from differentiation 409B2 not specified differentiated from 409B2 iPS
GSM95687 female 66 days from differentiation 414C2 not specified differentiated from 414C2 iPS
GSM956872 female 40 days from differentiation KhES1 not specified differentiated from KhES1 ES
GSM956873 female 40 days from differentiation KhES2 not specified differentiated from KhES2 ES
GSM956874 female 40 days from differentiation 201B7 not specified differentiated from 201B7 iPS
GSM956875 female 40 days from differentiation 253G1 not specified differentiated from 253G1 iPS
GSM956876 female 40 days from differentiation 253G4 not specified differentiated from 253G4 iPS
GSM956877 female 40 days from differentiation 414C2 not specified differentiated from 414C2 iPS
GSM956878 female 76 days from differentiation KhES1 not specified differentiated from KhES1 ES
GSM956879 female 76 days from differentiation KhES2 not specified differentiated from KhES2 ES
GSM956880 female 76 days from differentiation 201B7 not specified differentiated from 201B7 iPS
GSM95688 female 76 days from differentiation 253G1 not specified differentiated from 253G1 iPS
GSM956882 female 76 days from differentiation 253G4 not specified differentiated from 253G4 iPS
GSM956883 female 76 days from differentiation 409B2 not specified differentiated from 409B2 iPS
GSM956884 female 76 days from differentiation 414C2 not specified differentiated from 414C2 iPS
GSM956885 female P11 not specified human dermal fibroblast 36-year-old Caucasian female
GSM956886 female 203 days not specified neural stem/progenitor cells oh-NSC-3-fb Cultured neural stem/progenitor cells from forebrain tissues from Japanese human fetuses aged 10 gestational week
GSM956887 female 215 days not specified neural stem/progenitor cells oh-NSC-3-fb Cultured neural stem/progenitor cells from forebrain tissues from Japanese human fetuses aged 10 gestational week
GSM956888 female 227 days not specified neural stem/progenitor cells oh-NSC-3-fb Cultured neural stem/progenitor cells from forebrain tissues from Japanese human fetuses aged 10 gestational week
GSM956889 female 292 days not specified neural stem/progenitor cells oh-NSC-7-fb Cultured neural stem/progenitor cells from forebrain tissues from Japanese human fetuses aged 9 gestational week
GSM956890 female 304 days not specified neural stem/progenitor cells oh-NSC-7-fb Cultured neural stem/progenitor cells from forebrain tissues from Japanese human fetuses aged 9 gestational week
GSM95689 female 316 days not specified neural stem/progenitor cells oh-NSC-7-fb Cultured neural stem/progenitor cells from forebrain tissues from Japanese human fetuses aged 9 gestational week
GSM956892 female P9 not specified glioma-initiating cells GDC21 Cultured glioma-initiating cells from glioblastoma tissues from patient
GSM956893 male P5 not specified glioma-initiating cells GDC36 Cultured glioma-initiating cells from glioblastoma tissues from patient
GSM956894 female P6 not specified glioma-initiating cells GDC40 Cultured glioma-initiating cells from glioblastoma tissues from patient
GSM956895 male and female - not specified not specified not specified
GSM956895 male and female - not specified not specified not specified
GSM956895 male and female - not specified not specified not specified
GSM956895 male and female - not specified not specified not specified
GSM956895 male and female - not specified not specified not specified
GSM956895 male and female - not specified not specified not specified
GSM956895 male and female - not specified not specified not specified
GSM956895 male and female - not specified not specified not specified
GSM956895 male and female - not specified not specified not specified
GSM956895 male and female - not specified not specified not specified
GSM956905 male - not specified not specified not specified
GSM956895 male and female - not specified not specified not specified
GSM956895 male and female - not specified not specified not specified
GSM956895 male and female - not specified not specified not specified
GSM956895 male and female - not specified not specified not specified
GSM956895 male and female - not specified not specified not specified
GSM956895 male and female - not specified not specified not specified
GSM956905 male - not specified not specified not specified
GSM956895 male and female - not specified not specified not specified
GSM956895 male and female - not specified not specified not specified
GSM956895 male and female - not specified not specified not specified
GSM956916 female - not specified not specified not specified

Tags

  • bone
  • bone marrow
  • brain
  • cerebellum
  • colon
  • cortex
  • genome
  • gland
  • heart
  • intestine
  • kidney
  • liver
  • lung
  • muscle
  • pancreas
  • prostate
  • salivary gland
  • small intestine
  • spinal cord
  • spleen
  • stomach
  • thymus
  • trachea
  • uterus

Other Formats

JSON    XML
  • About
  • Blog
  • Help
  • FAQ
  • Downloads
  • API
  • iPhone App
  • Email updates
© 2026 The Scripps Research Institute. All rights reserved. (ver 94eefe6 )
  • Terms of Use