Dataset: Expression data of human induced pluripotent stem cells (hiPSCs), human embryonic stem cells (hESCs) and those differentiated cells.
We examined hiPSCs, hESCs and those differentiated cells to identify pluripotent signature genes, differentiation marker genes and...
We examined hiPSCs, hESCs and those differentiated cells to identify pluripotent signature genes, differentiation marker genes and relationship between expression and phenotypes. Additionally, we performed microarray experiments to examine gene expression in human tissues. This data was used for comparison with hESCs, hiPSCs and those differentiated cells. A total of 22 tissues (bone marrow, cerebellum, colon, cortex, fetal brain, heart, kidney, liver, lung, pancreas, prostate, salivary gland, skeletal muscle, small intestine, spinal cord, spleen, stomach, testes, thymus, thyroid, trachea and uterus) were examined. The hiPSCs, hESCs and those differentiated cells were cultured, and their cDNAs were used for microarray analysis. Total RNA isolated from cultivated cells and human tissues were labeled and hybridized to the GeneChip Human Genome U133 Plus 2.0 Array according to the manufacturer's protocol.
- Species:
- human
- Samples:
- 77
- Source:
- E-GEOD-39144
- Updated:
- Dec.12, 2014
- Registered:
- Sep.19, 2014
Sample | CULTURE DAYS | SOURCE | CELL LINE | CELL TYPE | SEX |
---|---|---|---|---|---|
GSM956840 | P27 | derived from inner cell mass of Japanese blastocysts | KhES1 | not specified | female |
GSM95684 | P27 | derived from inner cell mass of Japanese blastocysts | KhES2 | not specified | female |
GSM956842 | P26 | derived from inner cell mass of Japanese blastocysts | KhES3 | not specified | male |
GSM956843 | P18 | induced from human dermal fibroblast of 36-year-old Caucasian female | 201B6 | not specified | female |
GSM956844 | P18 | induced from human dermal fibroblast of 36-year-old Caucasian female | 201B7 | not specified | female |
GSM956845 | P18 | induced from human dermal fibroblast of 36-year-old Caucasian female | 253G1 | not specified | female |
GSM956846 | P15 | induced from human dermal fibroblast of 36-year-old Caucasian female | 253G4 | not specified | female |
GSM956847 | P22 | induced from human dermal fibroblast of 36-year-old Caucasian female | 409B2 | not specified | female |
GSM956848 | P29 | induced from human dermal fibroblast of 36-year-old Caucasian female | 414C2 | not specified | female |
GSM956849 | 30 days from differentiation | differentiated from KhES1 ES | KhES1 | not specified | female |
GSM956850 | 30 days from differentiation | differentiated from KhES2 ES | KhES2 | not specified | female |
GSM95685 | 30 days from differentiation | differentiated from KhES3 ES | KhES3 | not specified | male |
GSM956852 | 30 days from differentiation | differentiated from 201B6 iPS | 201B6 | not specified | female |
GSM956853 | 30 days from differentiation | differentiated from 201B7 iPS | 201B7 | not specified | female |
GSM956854 | 30 days from differentiation | differentiated from 253G1 iPS | 253G1 | not specified | female |
GSM956855 | 30 days from differentiation | differentiated from 253G4 iPS | 253G4 | not specified | female |
GSM956856 | 30 days from differentiation | differentiated from 409B2 iPS | 409B2 | not specified | female |
GSM956857 | 30 days from differentiation | differentiated from 414C2 iPS | 414C2 | not specified | female |
GSM956858 | 42 days from differentiation | differentiated from KhES1 ES | KhES1 | not specified | female |
GSM956859 | 42 days from differentiation | differentiated from KhES2 ES | KhES2 | not specified | female |
GSM956860 | 42 days from differentiation | differentiated from 201B7 iPS | 201B7 | not specified | female |
GSM95686 | 42 days from differentiation | differentiated from 253G1 iPS | 253G1 | not specified | female |
GSM956862 | 42 days from differentiation | differentiated from 253G4 iPS | 253G4 | not specified | female |
GSM956863 | 42 days from differentiation | differentiated from 409B2 iPS | 409B2 | not specified | female |
GSM956864 | 42 days from differentiation | differentiated from 414C2 iPS | 414C2 | not specified | female |
GSM956865 | 66 days from differentiation | differentiated from KhES1 ES | KhES1 | not specified | female |
GSM956866 | 66 days from differentiation | differentiated from KhES2 ES | KhES2 | not specified | female |
GSM956867 | 66 days from differentiation | differentiated from 201B7 iPS | 201B7 | not specified | female |
GSM956868 | 66 days from differentiation | differentiated from 253G1 iPS | 253G1 | not specified | female |
GSM956869 | 66 days from differentiation | differentiated from 253G4 iPS | 253G4 | not specified | female |
GSM956870 | 66 days from differentiation | differentiated from 409B2 iPS | 409B2 | not specified | female |
GSM95687 | 66 days from differentiation | differentiated from 414C2 iPS | 414C2 | not specified | female |
GSM956872 | 40 days from differentiation | differentiated from KhES1 ES | KhES1 | not specified | female |
GSM956873 | 40 days from differentiation | differentiated from KhES2 ES | KhES2 | not specified | female |
GSM956874 | 40 days from differentiation | differentiated from 201B7 iPS | 201B7 | not specified | female |
GSM956875 | 40 days from differentiation | differentiated from 253G1 iPS | 253G1 | not specified | female |
GSM956876 | 40 days from differentiation | differentiated from 253G4 iPS | 253G4 | not specified | female |
GSM956877 | 40 days from differentiation | differentiated from 414C2 iPS | 414C2 | not specified | female |
GSM956878 | 76 days from differentiation | differentiated from KhES1 ES | KhES1 | not specified | female |
GSM956879 | 76 days from differentiation | differentiated from KhES2 ES | KhES2 | not specified | female |
GSM956880 | 76 days from differentiation | differentiated from 201B7 iPS | 201B7 | not specified | female |
GSM95688 | 76 days from differentiation | differentiated from 253G1 iPS | 253G1 | not specified | female |
GSM956882 | 76 days from differentiation | differentiated from 253G4 iPS | 253G4 | not specified | female |
GSM956883 | 76 days from differentiation | differentiated from 409B2 iPS | 409B2 | not specified | female |
GSM956884 | 76 days from differentiation | differentiated from 414C2 iPS | 414C2 | not specified | female |
GSM956885 | P11 | 36-year-old Caucasian female | not specified | human dermal fibroblast | female |
GSM956886 | 203 days | Cultured neural stem/progenitor cells from forebrain tissues from Japanese human fetuses aged 10 gestational week | not specified | neural stem/progenitor cells oh-NSC-3-fb | female |
GSM956887 | 215 days | Cultured neural stem/progenitor cells from forebrain tissues from Japanese human fetuses aged 10 gestational week | not specified | neural stem/progenitor cells oh-NSC-3-fb | female |
GSM956888 | 227 days | Cultured neural stem/progenitor cells from forebrain tissues from Japanese human fetuses aged 10 gestational week | not specified | neural stem/progenitor cells oh-NSC-3-fb | female |
GSM956889 | 292 days | Cultured neural stem/progenitor cells from forebrain tissues from Japanese human fetuses aged 9 gestational week | not specified | neural stem/progenitor cells oh-NSC-7-fb | female |
GSM956890 | 304 days | Cultured neural stem/progenitor cells from forebrain tissues from Japanese human fetuses aged 9 gestational week | not specified | neural stem/progenitor cells oh-NSC-7-fb | female |
GSM95689 | 316 days | Cultured neural stem/progenitor cells from forebrain tissues from Japanese human fetuses aged 9 gestational week | not specified | neural stem/progenitor cells oh-NSC-7-fb | female |
GSM956892 | P9 | Cultured glioma-initiating cells from glioblastoma tissues from patient | not specified | glioma-initiating cells GDC21 | female |
GSM956893 | P5 | Cultured glioma-initiating cells from glioblastoma tissues from patient | not specified | glioma-initiating cells GDC36 | male |
GSM956894 | P6 | Cultured glioma-initiating cells from glioblastoma tissues from patient | not specified | glioma-initiating cells GDC40 | female |
GSM956895 | - | not specified | not specified | not specified | male and female |
GSM956895 | - | not specified | not specified | not specified | male and female |
GSM956895 | - | not specified | not specified | not specified | male and female |
GSM956895 | - | not specified | not specified | not specified | male and female |
GSM956895 | - | not specified | not specified | not specified | male and female |
GSM956895 | - | not specified | not specified | not specified | male and female |
GSM956895 | - | not specified | not specified | not specified | male and female |
GSM956895 | - | not specified | not specified | not specified | male and female |
GSM956895 | - | not specified | not specified | not specified | male and female |
GSM956895 | - | not specified | not specified | not specified | male and female |
GSM956905 | - | not specified | not specified | not specified | male |
GSM956895 | - | not specified | not specified | not specified | male and female |
GSM956895 | - | not specified | not specified | not specified | male and female |
GSM956895 | - | not specified | not specified | not specified | male and female |
GSM956895 | - | not specified | not specified | not specified | male and female |
GSM956895 | - | not specified | not specified | not specified | male and female |
GSM956895 | - | not specified | not specified | not specified | male and female |
GSM956905 | - | not specified | not specified | not specified | male |
GSM956895 | - | not specified | not specified | not specified | male and female |
GSM956895 | - | not specified | not specified | not specified | male and female |
GSM956895 | - | not specified | not specified | not specified | male and female |
GSM956916 | - | not specified | not specified | not specified | female |