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Home › Dataset Library › Expression data of human induced pluripotent stem cells (hiPSCs), human embryonic stem cells (hESCs) and those differentiated cells.

Dataset: Expression data of human induced pluripotent stem cells (hiPSCs), human embryonic stem cells (hESCs) and those differentiated cells.

We examined hiPSCs, hESCs and those differentiated cells to identify pluripotent signature genes, differentiation marker genes and...

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We examined hiPSCs, hESCs and those differentiated cells to identify pluripotent signature genes, differentiation marker genes and relationship between expression and phenotypes. Additionally, we performed microarray experiments to examine gene expression in human tissues. This data was used for comparison with hESCs, hiPSCs and those differentiated cells. A total of 22 tissues (bone marrow, cerebellum, colon, cortex, fetal brain, heart, kidney, liver, lung, pancreas, prostate, salivary gland, skeletal muscle, small intestine, spinal cord, spleen, stomach, testes, thymus, thyroid, trachea and uterus) were examined. The hiPSCs, hESCs and those differentiated cells were cultured, and their cDNAs were used for microarray analysis. Total RNA isolated from cultivated cells and human tissues were labeled and hybridized to the GeneChip Human Genome U133 Plus 2.0 Array according to the manufacturer's protocol.

Species:
human

Samples:
77

Source:
E-GEOD-39144

Updated:
Dec.12, 2014

Registered:
Sep.19, 2014


Factors: (via ArrayExpress)
Sample CULTURE DAYS SOURCE CELL LINE CELL TYPE SEX
GSM956840 P27 derived from inner cell mass of Japanese blastocysts KhES1 not specified female
GSM95684 P27 derived from inner cell mass of Japanese blastocysts KhES2 not specified female
GSM956842 P26 derived from inner cell mass of Japanese blastocysts KhES3 not specified male
GSM956843 P18 induced from human dermal fibroblast of 36-year-old Caucasian female 201B6 not specified female
GSM956844 P18 induced from human dermal fibroblast of 36-year-old Caucasian female 201B7 not specified female
GSM956845 P18 induced from human dermal fibroblast of 36-year-old Caucasian female 253G1 not specified female
GSM956846 P15 induced from human dermal fibroblast of 36-year-old Caucasian female 253G4 not specified female
GSM956847 P22 induced from human dermal fibroblast of 36-year-old Caucasian female 409B2 not specified female
GSM956848 P29 induced from human dermal fibroblast of 36-year-old Caucasian female 414C2 not specified female
GSM956849 30 days from differentiation differentiated from KhES1 ES KhES1 not specified female
GSM956850 30 days from differentiation differentiated from KhES2 ES KhES2 not specified female
GSM95685 30 days from differentiation differentiated from KhES3 ES KhES3 not specified male
GSM956852 30 days from differentiation differentiated from 201B6 iPS 201B6 not specified female
GSM956853 30 days from differentiation differentiated from 201B7 iPS 201B7 not specified female
GSM956854 30 days from differentiation differentiated from 253G1 iPS 253G1 not specified female
GSM956855 30 days from differentiation differentiated from 253G4 iPS 253G4 not specified female
GSM956856 30 days from differentiation differentiated from 409B2 iPS 409B2 not specified female
GSM956857 30 days from differentiation differentiated from 414C2 iPS 414C2 not specified female
GSM956858 42 days from differentiation differentiated from KhES1 ES KhES1 not specified female
GSM956859 42 days from differentiation differentiated from KhES2 ES KhES2 not specified female
GSM956860 42 days from differentiation differentiated from 201B7 iPS 201B7 not specified female
GSM95686 42 days from differentiation differentiated from 253G1 iPS 253G1 not specified female
GSM956862 42 days from differentiation differentiated from 253G4 iPS 253G4 not specified female
GSM956863 42 days from differentiation differentiated from 409B2 iPS 409B2 not specified female
GSM956864 42 days from differentiation differentiated from 414C2 iPS 414C2 not specified female
GSM956865 66 days from differentiation differentiated from KhES1 ES KhES1 not specified female
GSM956866 66 days from differentiation differentiated from KhES2 ES KhES2 not specified female
GSM956867 66 days from differentiation differentiated from 201B7 iPS 201B7 not specified female
GSM956868 66 days from differentiation differentiated from 253G1 iPS 253G1 not specified female
GSM956869 66 days from differentiation differentiated from 253G4 iPS 253G4 not specified female
GSM956870 66 days from differentiation differentiated from 409B2 iPS 409B2 not specified female
GSM95687 66 days from differentiation differentiated from 414C2 iPS 414C2 not specified female
GSM956872 40 days from differentiation differentiated from KhES1 ES KhES1 not specified female
GSM956873 40 days from differentiation differentiated from KhES2 ES KhES2 not specified female
GSM956874 40 days from differentiation differentiated from 201B7 iPS 201B7 not specified female
GSM956875 40 days from differentiation differentiated from 253G1 iPS 253G1 not specified female
GSM956876 40 days from differentiation differentiated from 253G4 iPS 253G4 not specified female
GSM956877 40 days from differentiation differentiated from 414C2 iPS 414C2 not specified female
GSM956878 76 days from differentiation differentiated from KhES1 ES KhES1 not specified female
GSM956879 76 days from differentiation differentiated from KhES2 ES KhES2 not specified female
GSM956880 76 days from differentiation differentiated from 201B7 iPS 201B7 not specified female
GSM95688 76 days from differentiation differentiated from 253G1 iPS 253G1 not specified female
GSM956882 76 days from differentiation differentiated from 253G4 iPS 253G4 not specified female
GSM956883 76 days from differentiation differentiated from 409B2 iPS 409B2 not specified female
GSM956884 76 days from differentiation differentiated from 414C2 iPS 414C2 not specified female
GSM956885 P11 36-year-old Caucasian female not specified human dermal fibroblast female
GSM956886 203 days Cultured neural stem/progenitor cells from forebrain tissues from Japanese human fetuses aged 10 gestational week not specified neural stem/progenitor cells oh-NSC-3-fb female
GSM956887 215 days Cultured neural stem/progenitor cells from forebrain tissues from Japanese human fetuses aged 10 gestational week not specified neural stem/progenitor cells oh-NSC-3-fb female
GSM956888 227 days Cultured neural stem/progenitor cells from forebrain tissues from Japanese human fetuses aged 10 gestational week not specified neural stem/progenitor cells oh-NSC-3-fb female
GSM956889 292 days Cultured neural stem/progenitor cells from forebrain tissues from Japanese human fetuses aged 9 gestational week not specified neural stem/progenitor cells oh-NSC-7-fb female
GSM956890 304 days Cultured neural stem/progenitor cells from forebrain tissues from Japanese human fetuses aged 9 gestational week not specified neural stem/progenitor cells oh-NSC-7-fb female
GSM95689 316 days Cultured neural stem/progenitor cells from forebrain tissues from Japanese human fetuses aged 9 gestational week not specified neural stem/progenitor cells oh-NSC-7-fb female
GSM956892 P9 Cultured glioma-initiating cells from glioblastoma tissues from patient not specified glioma-initiating cells GDC21 female
GSM956893 P5 Cultured glioma-initiating cells from glioblastoma tissues from patient not specified glioma-initiating cells GDC36 male
GSM956894 P6 Cultured glioma-initiating cells from glioblastoma tissues from patient not specified glioma-initiating cells GDC40 female
GSM956895 - not specified not specified not specified male and female
GSM956895 - not specified not specified not specified male and female
GSM956895 - not specified not specified not specified male and female
GSM956895 - not specified not specified not specified male and female
GSM956895 - not specified not specified not specified male and female
GSM956895 - not specified not specified not specified male and female
GSM956895 - not specified not specified not specified male and female
GSM956895 - not specified not specified not specified male and female
GSM956895 - not specified not specified not specified male and female
GSM956895 - not specified not specified not specified male and female
GSM956905 - not specified not specified not specified male
GSM956895 - not specified not specified not specified male and female
GSM956895 - not specified not specified not specified male and female
GSM956895 - not specified not specified not specified male and female
GSM956895 - not specified not specified not specified male and female
GSM956895 - not specified not specified not specified male and female
GSM956895 - not specified not specified not specified male and female
GSM956905 - not specified not specified not specified male
GSM956895 - not specified not specified not specified male and female
GSM956895 - not specified not specified not specified male and female
GSM956895 - not specified not specified not specified male and female
GSM956916 - not specified not specified not specified female

Tags

  • bone
  • bone marrow
  • brain
  • cerebellum
  • colon
  • cortex
  • genome
  • gland
  • heart
  • intestine
  • kidney
  • liver
  • lung
  • muscle
  • pancreas
  • prostate
  • salivary gland
  • small intestine
  • spinal cord
  • spleen
  • stomach
  • thymus
  • trachea
  • uterus

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