Dataset: Expression data of human induced pluripotent stem cells (hiPSCs), human embryonic stem cells (hESCs) and those differentiated cells.
We examined hiPSCs, hESCs and those differentiated cells to identify pluripotent signature genes, differentiation marker genes and...
We examined hiPSCs, hESCs and those differentiated cells to identify pluripotent signature genes, differentiation marker genes and relationship between expression and phenotypes. Additionally, we performed microarray experiments to examine gene expression in human tissues. This data was used for comparison with hESCs, hiPSCs and those differentiated cells. A total of 22 tissues (bone marrow, cerebellum, colon, cortex, fetal brain, heart, kidney, liver, lung, pancreas, prostate, salivary gland, skeletal muscle, small intestine, spinal cord, spleen, stomach, testes, thymus, thyroid, trachea and uterus) were examined. The hiPSCs, hESCs and those differentiated cells were cultured, and their cDNAs were used for microarray analysis. Total RNA isolated from cultivated cells and human tissues were labeled and hybridized to the GeneChip Human Genome U133 Plus 2.0 Array according to the manufacturer's protocol.
- Species:
- human
- Samples:
- 77
- Source:
- E-GEOD-39144
- Updated:
- Dec.12, 2014
- Registered:
- Sep.19, 2014
Sample | SOURCE | CULTURE DAYS | CELL TYPE | CELL LINE | SEX |
---|---|---|---|---|---|
GSM956840 | derived from inner cell mass of Japanese blastocysts | P27 | not specified | KhES1 | female |
GSM95684 | derived from inner cell mass of Japanese blastocysts | P27 | not specified | KhES2 | female |
GSM956842 | derived from inner cell mass of Japanese blastocysts | P26 | not specified | KhES3 | male |
GSM956843 | induced from human dermal fibroblast of 36-year-old Caucasian female | P18 | not specified | 201B6 | female |
GSM956844 | induced from human dermal fibroblast of 36-year-old Caucasian female | P18 | not specified | 201B7 | female |
GSM956845 | induced from human dermal fibroblast of 36-year-old Caucasian female | P18 | not specified | 253G1 | female |
GSM956846 | induced from human dermal fibroblast of 36-year-old Caucasian female | P15 | not specified | 253G4 | female |
GSM956847 | induced from human dermal fibroblast of 36-year-old Caucasian female | P22 | not specified | 409B2 | female |
GSM956848 | induced from human dermal fibroblast of 36-year-old Caucasian female | P29 | not specified | 414C2 | female |
GSM956849 | differentiated from KhES1 ES | 30 days from differentiation | not specified | KhES1 | female |
GSM956850 | differentiated from KhES2 ES | 30 days from differentiation | not specified | KhES2 | female |
GSM95685 | differentiated from KhES3 ES | 30 days from differentiation | not specified | KhES3 | male |
GSM956852 | differentiated from 201B6 iPS | 30 days from differentiation | not specified | 201B6 | female |
GSM956853 | differentiated from 201B7 iPS | 30 days from differentiation | not specified | 201B7 | female |
GSM956854 | differentiated from 253G1 iPS | 30 days from differentiation | not specified | 253G1 | female |
GSM956855 | differentiated from 253G4 iPS | 30 days from differentiation | not specified | 253G4 | female |
GSM956856 | differentiated from 409B2 iPS | 30 days from differentiation | not specified | 409B2 | female |
GSM956857 | differentiated from 414C2 iPS | 30 days from differentiation | not specified | 414C2 | female |
GSM956858 | differentiated from KhES1 ES | 42 days from differentiation | not specified | KhES1 | female |
GSM956859 | differentiated from KhES2 ES | 42 days from differentiation | not specified | KhES2 | female |
GSM956860 | differentiated from 201B7 iPS | 42 days from differentiation | not specified | 201B7 | female |
GSM95686 | differentiated from 253G1 iPS | 42 days from differentiation | not specified | 253G1 | female |
GSM956862 | differentiated from 253G4 iPS | 42 days from differentiation | not specified | 253G4 | female |
GSM956863 | differentiated from 409B2 iPS | 42 days from differentiation | not specified | 409B2 | female |
GSM956864 | differentiated from 414C2 iPS | 42 days from differentiation | not specified | 414C2 | female |
GSM956865 | differentiated from KhES1 ES | 66 days from differentiation | not specified | KhES1 | female |
GSM956866 | differentiated from KhES2 ES | 66 days from differentiation | not specified | KhES2 | female |
GSM956867 | differentiated from 201B7 iPS | 66 days from differentiation | not specified | 201B7 | female |
GSM956868 | differentiated from 253G1 iPS | 66 days from differentiation | not specified | 253G1 | female |
GSM956869 | differentiated from 253G4 iPS | 66 days from differentiation | not specified | 253G4 | female |
GSM956870 | differentiated from 409B2 iPS | 66 days from differentiation | not specified | 409B2 | female |
GSM95687 | differentiated from 414C2 iPS | 66 days from differentiation | not specified | 414C2 | female |
GSM956872 | differentiated from KhES1 ES | 40 days from differentiation | not specified | KhES1 | female |
GSM956873 | differentiated from KhES2 ES | 40 days from differentiation | not specified | KhES2 | female |
GSM956874 | differentiated from 201B7 iPS | 40 days from differentiation | not specified | 201B7 | female |
GSM956875 | differentiated from 253G1 iPS | 40 days from differentiation | not specified | 253G1 | female |
GSM956876 | differentiated from 253G4 iPS | 40 days from differentiation | not specified | 253G4 | female |
GSM956877 | differentiated from 414C2 iPS | 40 days from differentiation | not specified | 414C2 | female |
GSM956878 | differentiated from KhES1 ES | 76 days from differentiation | not specified | KhES1 | female |
GSM956879 | differentiated from KhES2 ES | 76 days from differentiation | not specified | KhES2 | female |
GSM956880 | differentiated from 201B7 iPS | 76 days from differentiation | not specified | 201B7 | female |
GSM95688 | differentiated from 253G1 iPS | 76 days from differentiation | not specified | 253G1 | female |
GSM956882 | differentiated from 253G4 iPS | 76 days from differentiation | not specified | 253G4 | female |
GSM956883 | differentiated from 409B2 iPS | 76 days from differentiation | not specified | 409B2 | female |
GSM956884 | differentiated from 414C2 iPS | 76 days from differentiation | not specified | 414C2 | female |
GSM956885 | 36-year-old Caucasian female | P11 | human dermal fibroblast | not specified | female |
GSM956886 | Cultured neural stem/progenitor cells from forebrain tissues from Japanese human fetuses aged 10 gestational week | 203 days | neural stem/progenitor cells oh-NSC-3-fb | not specified | female |
GSM956887 | Cultured neural stem/progenitor cells from forebrain tissues from Japanese human fetuses aged 10 gestational week | 215 days | neural stem/progenitor cells oh-NSC-3-fb | not specified | female |
GSM956888 | Cultured neural stem/progenitor cells from forebrain tissues from Japanese human fetuses aged 10 gestational week | 227 days | neural stem/progenitor cells oh-NSC-3-fb | not specified | female |
GSM956889 | Cultured neural stem/progenitor cells from forebrain tissues from Japanese human fetuses aged 9 gestational week | 292 days | neural stem/progenitor cells oh-NSC-7-fb | not specified | female |
GSM956890 | Cultured neural stem/progenitor cells from forebrain tissues from Japanese human fetuses aged 9 gestational week | 304 days | neural stem/progenitor cells oh-NSC-7-fb | not specified | female |
GSM95689 | Cultured neural stem/progenitor cells from forebrain tissues from Japanese human fetuses aged 9 gestational week | 316 days | neural stem/progenitor cells oh-NSC-7-fb | not specified | female |
GSM956892 | Cultured glioma-initiating cells from glioblastoma tissues from patient | P9 | glioma-initiating cells GDC21 | not specified | female |
GSM956893 | Cultured glioma-initiating cells from glioblastoma tissues from patient | P5 | glioma-initiating cells GDC36 | not specified | male |
GSM956894 | Cultured glioma-initiating cells from glioblastoma tissues from patient | P6 | glioma-initiating cells GDC40 | not specified | female |
GSM956895 | not specified | - | not specified | not specified | male and female |
GSM956895 | not specified | - | not specified | not specified | male and female |
GSM956895 | not specified | - | not specified | not specified | male and female |
GSM956895 | not specified | - | not specified | not specified | male and female |
GSM956895 | not specified | - | not specified | not specified | male and female |
GSM956895 | not specified | - | not specified | not specified | male and female |
GSM956895 | not specified | - | not specified | not specified | male and female |
GSM956895 | not specified | - | not specified | not specified | male and female |
GSM956895 | not specified | - | not specified | not specified | male and female |
GSM956895 | not specified | - | not specified | not specified | male and female |
GSM956905 | not specified | - | not specified | not specified | male |
GSM956895 | not specified | - | not specified | not specified | male and female |
GSM956895 | not specified | - | not specified | not specified | male and female |
GSM956895 | not specified | - | not specified | not specified | male and female |
GSM956895 | not specified | - | not specified | not specified | male and female |
GSM956895 | not specified | - | not specified | not specified | male and female |
GSM956895 | not specified | - | not specified | not specified | male and female |
GSM956905 | not specified | - | not specified | not specified | male |
GSM956895 | not specified | - | not specified | not specified | male and female |
GSM956895 | not specified | - | not specified | not specified | male and female |
GSM956895 | not specified | - | not specified | not specified | male and female |
GSM956916 | not specified | - | not specified | not specified | female |