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Home › Dataset Library › Expression data of human induced pluripotent stem cells (hiPSCs), human embryonic stem cells (hESCs) and those differentiated cells.

Dataset: Expression data of human induced pluripotent stem cells (hiPSCs), human embryonic stem cells (hESCs) and those differentiated cells.

We examined hiPSCs, hESCs and those differentiated cells to identify pluripotent signature genes, differentiation marker genes and...

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We examined hiPSCs, hESCs and those differentiated cells to identify pluripotent signature genes, differentiation marker genes and relationship between expression and phenotypes. Additionally, we performed microarray experiments to examine gene expression in human tissues. This data was used for comparison with hESCs, hiPSCs and those differentiated cells. A total of 22 tissues (bone marrow, cerebellum, colon, cortex, fetal brain, heart, kidney, liver, lung, pancreas, prostate, salivary gland, skeletal muscle, small intestine, spinal cord, spleen, stomach, testes, thymus, thyroid, trachea and uterus) were examined. The hiPSCs, hESCs and those differentiated cells were cultured, and their cDNAs were used for microarray analysis. Total RNA isolated from cultivated cells and human tissues were labeled and hybridized to the GeneChip Human Genome U133 Plus 2.0 Array according to the manufacturer's protocol.

Species:
human

Samples:
77

Source:
E-GEOD-39144

Updated:
Dec.12, 2014

Registered:
Sep.19, 2014


Factors: (via ArrayExpress)
Sample SOURCE CELL LINE CELL TYPE CULTURE DAYS SEX
GSM956840 derived from inner cell mass of Japanese blastocysts KhES1 not specified P27 female
GSM95684 derived from inner cell mass of Japanese blastocysts KhES2 not specified P27 female
GSM956842 derived from inner cell mass of Japanese blastocysts KhES3 not specified P26 male
GSM956843 induced from human dermal fibroblast of 36-year-old Caucasian female 201B6 not specified P18 female
GSM956844 induced from human dermal fibroblast of 36-year-old Caucasian female 201B7 not specified P18 female
GSM956845 induced from human dermal fibroblast of 36-year-old Caucasian female 253G1 not specified P18 female
GSM956846 induced from human dermal fibroblast of 36-year-old Caucasian female 253G4 not specified P15 female
GSM956847 induced from human dermal fibroblast of 36-year-old Caucasian female 409B2 not specified P22 female
GSM956848 induced from human dermal fibroblast of 36-year-old Caucasian female 414C2 not specified P29 female
GSM956849 differentiated from KhES1 ES KhES1 not specified 30 days from differentiation female
GSM956850 differentiated from KhES2 ES KhES2 not specified 30 days from differentiation female
GSM95685 differentiated from KhES3 ES KhES3 not specified 30 days from differentiation male
GSM956852 differentiated from 201B6 iPS 201B6 not specified 30 days from differentiation female
GSM956853 differentiated from 201B7 iPS 201B7 not specified 30 days from differentiation female
GSM956854 differentiated from 253G1 iPS 253G1 not specified 30 days from differentiation female
GSM956855 differentiated from 253G4 iPS 253G4 not specified 30 days from differentiation female
GSM956856 differentiated from 409B2 iPS 409B2 not specified 30 days from differentiation female
GSM956857 differentiated from 414C2 iPS 414C2 not specified 30 days from differentiation female
GSM956858 differentiated from KhES1 ES KhES1 not specified 42 days from differentiation female
GSM956859 differentiated from KhES2 ES KhES2 not specified 42 days from differentiation female
GSM956860 differentiated from 201B7 iPS 201B7 not specified 42 days from differentiation female
GSM95686 differentiated from 253G1 iPS 253G1 not specified 42 days from differentiation female
GSM956862 differentiated from 253G4 iPS 253G4 not specified 42 days from differentiation female
GSM956863 differentiated from 409B2 iPS 409B2 not specified 42 days from differentiation female
GSM956864 differentiated from 414C2 iPS 414C2 not specified 42 days from differentiation female
GSM956865 differentiated from KhES1 ES KhES1 not specified 66 days from differentiation female
GSM956866 differentiated from KhES2 ES KhES2 not specified 66 days from differentiation female
GSM956867 differentiated from 201B7 iPS 201B7 not specified 66 days from differentiation female
GSM956868 differentiated from 253G1 iPS 253G1 not specified 66 days from differentiation female
GSM956869 differentiated from 253G4 iPS 253G4 not specified 66 days from differentiation female
GSM956870 differentiated from 409B2 iPS 409B2 not specified 66 days from differentiation female
GSM95687 differentiated from 414C2 iPS 414C2 not specified 66 days from differentiation female
GSM956872 differentiated from KhES1 ES KhES1 not specified 40 days from differentiation female
GSM956873 differentiated from KhES2 ES KhES2 not specified 40 days from differentiation female
GSM956874 differentiated from 201B7 iPS 201B7 not specified 40 days from differentiation female
GSM956875 differentiated from 253G1 iPS 253G1 not specified 40 days from differentiation female
GSM956876 differentiated from 253G4 iPS 253G4 not specified 40 days from differentiation female
GSM956877 differentiated from 414C2 iPS 414C2 not specified 40 days from differentiation female
GSM956878 differentiated from KhES1 ES KhES1 not specified 76 days from differentiation female
GSM956879 differentiated from KhES2 ES KhES2 not specified 76 days from differentiation female
GSM956880 differentiated from 201B7 iPS 201B7 not specified 76 days from differentiation female
GSM95688 differentiated from 253G1 iPS 253G1 not specified 76 days from differentiation female
GSM956882 differentiated from 253G4 iPS 253G4 not specified 76 days from differentiation female
GSM956883 differentiated from 409B2 iPS 409B2 not specified 76 days from differentiation female
GSM956884 differentiated from 414C2 iPS 414C2 not specified 76 days from differentiation female
GSM956885 36-year-old Caucasian female not specified human dermal fibroblast P11 female
GSM956886 Cultured neural stem/progenitor cells from forebrain tissues from Japanese human fetuses aged 10 gestational week not specified neural stem/progenitor cells oh-NSC-3-fb 203 days female
GSM956887 Cultured neural stem/progenitor cells from forebrain tissues from Japanese human fetuses aged 10 gestational week not specified neural stem/progenitor cells oh-NSC-3-fb 215 days female
GSM956888 Cultured neural stem/progenitor cells from forebrain tissues from Japanese human fetuses aged 10 gestational week not specified neural stem/progenitor cells oh-NSC-3-fb 227 days female
GSM956889 Cultured neural stem/progenitor cells from forebrain tissues from Japanese human fetuses aged 9 gestational week not specified neural stem/progenitor cells oh-NSC-7-fb 292 days female
GSM956890 Cultured neural stem/progenitor cells from forebrain tissues from Japanese human fetuses aged 9 gestational week not specified neural stem/progenitor cells oh-NSC-7-fb 304 days female
GSM95689 Cultured neural stem/progenitor cells from forebrain tissues from Japanese human fetuses aged 9 gestational week not specified neural stem/progenitor cells oh-NSC-7-fb 316 days female
GSM956892 Cultured glioma-initiating cells from glioblastoma tissues from patient not specified glioma-initiating cells GDC21 P9 female
GSM956893 Cultured glioma-initiating cells from glioblastoma tissues from patient not specified glioma-initiating cells GDC36 P5 male
GSM956894 Cultured glioma-initiating cells from glioblastoma tissues from patient not specified glioma-initiating cells GDC40 P6 female
GSM956895 not specified not specified not specified - male and female
GSM956895 not specified not specified not specified - male and female
GSM956895 not specified not specified not specified - male and female
GSM956895 not specified not specified not specified - male and female
GSM956895 not specified not specified not specified - male and female
GSM956895 not specified not specified not specified - male and female
GSM956895 not specified not specified not specified - male and female
GSM956895 not specified not specified not specified - male and female
GSM956895 not specified not specified not specified - male and female
GSM956895 not specified not specified not specified - male and female
GSM956905 not specified not specified not specified - male
GSM956895 not specified not specified not specified - male and female
GSM956895 not specified not specified not specified - male and female
GSM956895 not specified not specified not specified - male and female
GSM956895 not specified not specified not specified - male and female
GSM956895 not specified not specified not specified - male and female
GSM956895 not specified not specified not specified - male and female
GSM956905 not specified not specified not specified - male
GSM956895 not specified not specified not specified - male and female
GSM956895 not specified not specified not specified - male and female
GSM956895 not specified not specified not specified - male and female
GSM956916 not specified not specified not specified - female

Tags

  • bone
  • bone marrow
  • brain
  • cerebellum
  • colon
  • cortex
  • genome
  • gland
  • heart
  • intestine
  • kidney
  • liver
  • lung
  • muscle
  • pancreas
  • prostate
  • salivary gland
  • small intestine
  • spinal cord
  • spleen
  • stomach
  • thymus
  • trachea
  • uterus

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