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Home › Dataset Library › Expression data from human colonic biopsy samples (adenoma-carcinoma)

Dataset: Expression data from human colonic biopsy samples (adenoma-carcinoma)

Whole genomic microarray analysis was performed in order to identify gene expression profile alterations focusing on the dysplastic...

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Whole genomic microarray analysis was performed in order to identify gene expression profile alterations focusing on the dysplastic adenoma-carcinoma transition. Our aims were to determinate characteristic transcript sets for developing diagnostic mRNA expression patterns for objective classification of benign and malignant colorectal diseases and to test the classificatory power of these markers on an independent sample set. Total RNA was extracted from colonic biopsy samples of histologically negative patients and of patients with adenoma or colorectal cancer and were hybridized on Affymetrix HGU133 Plus 2.0 microarrays

Species:
human

Samples:
94

Source:
E-GEOD-37364

Updated:
Dec.12, 2014

Registered:
Jul.12, 2014


Factors: (via ArrayExpress)
Sample DISEASE STATE STAGE
GSM916780 Normal colonic mucosa not specified
GSM916780 Normal colonic mucosa not specified
GSM916780 Normal colonic mucosa not specified
GSM916780 Normal colonic mucosa not specified
GSM916780 Normal colonic mucosa not specified
GSM916780 Normal colonic mucosa not specified
GSM916780 Normal colonic mucosa not specified
GSM916780 Normal colonic mucosa not specified
GSM916780 Normal colonic mucosa not specified
GSM916780 Normal colonic mucosa not specified
GSM916780 Normal colonic mucosa not specified
GSM916780 Normal colonic mucosa not specified
GSM916780 Normal colonic mucosa not specified
GSM916780 Normal colonic mucosa not specified
GSM916780 Normal colonic mucosa not specified
GSM916780 Normal colonic mucosa not specified
GSM916780 Normal colonic mucosa not specified
GSM916780 Normal colonic mucosa not specified
GSM916780 Normal colonic mucosa not specified
GSM916780 Normal colonic mucosa not specified
GSM916780 Normal colonic mucosa not specified
GSM916780 Normal colonic mucosa not specified
GSM916780 Normal colonic mucosa not specified
GSM916780 Normal colonic mucosa not specified
GSM916780 Normal colonic mucosa not specified
GSM916780 Normal colonic mucosa not specified
GSM916780 Normal colonic mucosa not specified
GSM916780 Normal colonic mucosa not specified
GSM916780 Normal colonic mucosa not specified
GSM916780 Normal colonic mucosa not specified
GSM916780 Normal colonic mucosa not specified
GSM916780 Normal colonic mucosa not specified
GSM916780 Normal colonic mucosa not specified
GSM916780 Normal colonic mucosa not specified
GSM916780 Normal colonic mucosa not specified
GSM916780 Normal colonic mucosa not specified
GSM916780 Normal colonic mucosa not specified
GSM916780 Normal colonic mucosa not specified
GSM916742 not specified Dukes C/D
GSM916742 not specified Dukes C/D
GSM916742 not specified Dukes C/D
GSM916742 not specified Dukes C/D
GSM916742 not specified Dukes C/D
GSM916742 not specified Dukes C/D
GSM916742 not specified Dukes C/D
GSM916742 not specified Dukes C/D
GSM916742 not specified Dukes C/D
GSM916742 not specified Dukes C/D
GSM916742 not specified Dukes C/D
GSM916742 not specified Dukes C/D
GSM916742 not specified Dukes C/D
GSM916729 colorectal adenocarcinoma Dukes A/B
GSM916729 colorectal adenocarcinoma Dukes A/B
GSM916729 colorectal adenocarcinoma Dukes A/B
GSM916729 colorectal adenocarcinoma Dukes A/B
GSM916729 colorectal adenocarcinoma Dukes A/B
GSM916729 colorectal adenocarcinoma Dukes A/B
GSM916729 colorectal adenocarcinoma Dukes A/B
GSM916729 colorectal adenocarcinoma Dukes A/B
GSM916729 colorectal adenocarcinoma Dukes A/B
GSM916729 colorectal adenocarcinoma Dukes A/B
GSM916729 colorectal adenocarcinoma Dukes A/B
GSM916729 colorectal adenocarcinoma Dukes A/B
GSM916729 colorectal adenocarcinoma Dukes A/B
GSM916729 colorectal adenocarcinoma Dukes A/B
GSM916715 Adenoma low-grade dysplasia
GSM916715 Adenoma low-grade dysplasia
GSM916715 Adenoma low-grade dysplasia
GSM916715 Adenoma low-grade dysplasia
GSM916715 Adenoma low-grade dysplasia
GSM916715 Adenoma low-grade dysplasia
GSM916715 Adenoma low-grade dysplasia
GSM916715 Adenoma low-grade dysplasia
GSM916715 Adenoma low-grade dysplasia
GSM916715 Adenoma low-grade dysplasia
GSM916715 Adenoma low-grade dysplasia
GSM916715 Adenoma low-grade dysplasia
GSM916715 Adenoma low-grade dysplasia
GSM916715 Adenoma low-grade dysplasia
GSM916715 Adenoma low-grade dysplasia
GSM916715 Adenoma low-grade dysplasia
GSM916699 Adenoma high-grade dysplasia
GSM916699 Adenoma high-grade dysplasia
GSM916699 Adenoma high-grade dysplasia
GSM916699 Adenoma high-grade dysplasia
GSM916699 Adenoma high-grade dysplasia
GSM916699 Adenoma high-grade dysplasia
GSM916699 Adenoma high-grade dysplasia
GSM916699 Adenoma high-grade dysplasia
GSM916699 Adenoma high-grade dysplasia
GSM916699 Adenoma high-grade dysplasia
GSM916699 Adenoma high-grade dysplasia
GSM916699 Adenoma high-grade dysplasia
GSM916699 Adenoma high-grade dysplasia

Tags

  • adenoma
  • cancer
  • carcinoma
  • colorectal cancer

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