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Home › Dataset Library › Transcription profiling of rat brain tissue samples from cocaine-treated and saline-treated control animals

Dataset: Transcription profiling of rat brain tissue samples from cocaine-treated and saline-treated control animals

The 10 samples below represent a study where gene expression levels were measured in 5 different parts of the rat brain under cocaine-...

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The 10 samples below represent a study where gene expression levels were measured in 5 different parts of the rat brain under cocaine-treated (GSM4696, GSM4698 - GSM4701) and saline-treated control (GSM4702 - GSM4706) conditions. The regions studied were amygdala (amy), caudate putamen (cpu), nucleus acumbens (na), prefrontal cortex (cpu), and the ventral tegmental area (vta). The data were analyzed using two different computational techniques, viz. singular value decomposition (SVD) and self-organizing maps (SOM), to identify a common set of genes that were regulated by cocaine administration.

Species:
rat

Samples:
10

Source:
E-GEOD-340

Updated:
Feb.09, 2015

Registered:
Jan.11, 2015


Factors: (via ArrayExpress)
Sample OrganismPart Compound
GSE340GSM4696 amygdala cocaine
GSE340GSM4702 amygdala saline
GSE340GSM4698 caudate putamen cocaine
GSE340GSM4703 caudate putamen saline
GSE340GSM4699 nucleus acumbens cocaine
GSE340GSM4704 nucleus acumbens saline
GSE340GSM4700 prefrontal cortex cocaine
GSE340GSM4705 prefrontal cortex saline
GSE340GSM4701 ventral tegmental area cocaine
GSE340GSM4706 ventral tegmental area saline

Tags

  • amygdala
  • brain
  • cortex
  • prefrontal cortex
  • putamen
  • ventral
  • ventral tegmental area

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