<?xml version="1.0" encoding="ASCII"?>
<biogps><data><item key="owner">ArrayExpress Uploader</item><item key="pop_total">0</item><item key="species">rat</item><item key="factors"><item><item key="GSE340GSM4696"><item key="Compound">cocaine</item><item key="OrganismPart">amygdala</item></item></item><item><item key="GSE340GSM4702"><item key="Compound">saline</item><item key="OrganismPart">amygdala</item></item></item><item><item key="GSE340GSM4698"><item key="Compound">cocaine</item><item key="OrganismPart">caudate putamen</item></item></item><item><item key="GSE340GSM4703"><item key="Compound">saline</item><item key="OrganismPart">caudate putamen</item></item></item><item><item key="GSE340GSM4699"><item key="Compound">cocaine</item><item key="OrganismPart">nucleus acumbens</item></item></item><item><item key="GSE340GSM4704"><item key="Compound">saline</item><item key="OrganismPart">nucleus acumbens</item></item></item><item><item key="GSE340GSM4700"><item key="Compound">cocaine</item><item key="OrganismPart">prefrontal cortex</item></item></item><item><item key="GSE340GSM4705"><item key="Compound">saline</item><item key="OrganismPart">prefrontal cortex</item></item></item><item><item key="GSE340GSM4701"><item key="Compound">cocaine</item><item key="OrganismPart">ventral tegmental area</item></item></item><item><item key="GSE340GSM4706"><item key="Compound">saline</item><item key="OrganismPart">ventral tegmental area</item></item></item></item><item key="id">9429</item><item key="ownerprofile_id">arrayexpress_sid</item><item key="platform">9</item><item key="summary_wrapped">The 10 samples below represent a study where gene expression levels were measured in 5 different parts of the rat brain under cocaine-...</item><item key="geo_gse_id">E-GEOD-340</item><item key="owner_profile">/profile/8773/arrayexpressuploader</item><item key="factor_count">2</item><item key="sample_count">10</item><item key="tags"><item>amygdala</item><item>brain</item><item>cortex</item><item>prefrontal cortex</item><item>putamen</item><item>ventral</item><item>ventral tegmental area</item></item><item key="lastmodified">Feb.09, 2015</item><item key="is_default">False</item><item key="geo_gds_id"/><item key="slug">transcription-profiling-of-rat-brain-tissue-sample</item><item key="geo_id_plat">E-GEOD-340_A-AFFY-18</item><item key="name">Transcription profiling of rat brain tissue samples from cocaine-treated and saline-treated control animals</item><item key="created">Jan.11, 2015</item><item key="summary">The 10 samples below represent a study where gene expression levels were measured in 5 different parts of the rat brain under cocaine-treated (GSM4696, GSM4698 - GSM4701) and saline-treated control (GSM4702 - GSM4706) conditions. The regions studied were amygdala (amy), caudate putamen (cpu), nucleus acumbens (na), prefrontal cortex (cpu), and the ventral tegmental area (vta). The data were analyzed using two different computational techniques, viz. singular value decomposition (SVD) and self-organizing maps (SOM), to identify a common set of genes that were regulated by cocaine administration.</item><item key="source">http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-340</item><item key="sample_source">http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-340/samples/</item></data></biogps>
