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Home › Dataset Library › Expression data from mouse muscle

Dataset: Expression data from mouse muscle

The knock-out of calpain 3 (C3KO) is a murine model for calpainopathies wich shows a mild dystrophic phenotype with signs of muscle...

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The knock-out of calpain 3 (C3KO) is a murine model for calpainopathies wich shows a mild dystrophic phenotype with signs of muscle degeneration. Adult (A) mice show a more severe phenotype than young (Y) mice which only present inflammatory infiltrates in most severely affected muscles, such as the soleus. Other muscles (e.g. quadriceps) are much less affected. We used microarray technology to compare gene expression profiles of young and adult muscles in wild-type (wt) and C3KO mice, in two types of muscle: soleus (affected) and quadriceps (much less affected). 11 wt (7 adult and 4 young) and 11 C3KO (7 adult and 4 young) mice were used in this study for RNA extraction and hybridization on Affymetrix microarrays. The soleus and the quadriceps muscles were obtained from each mouse. All mice were males.

Species:
mouse

Samples:
42

Source:
E-GEOD-33931

Updated:
Dec.12, 2014

Registered:
Nov.12, 2014


Factors: (via ArrayExpress)
Sample AGE ORGANISM PART VARIATION
GSM838939 A (11-12 months) Soleus muscle wild-type
GSM838940 A (11-12 months) Quadriceps muscle wild-type
GSM838940 A (11-12 months) Quadriceps muscle wild-type
GSM838939 A (11-12 months) Soleus muscle wild-type
GSM838943 A (11-12 months) Quadriceps muscle C3KO
GSM838944 A (11-12 months) Soleus muscle C3KO
GSM838943 A (11-12 months) Quadriceps muscle C3KO
GSM838944 A (11-12 months) Soleus muscle C3KO
GSM838943 A (11-12 months) Quadriceps muscle C3KO
GSM838944 A (11-12 months) Soleus muscle C3KO
GSM838943 A (11-12 months) Quadriceps muscle C3KO
GSM838944 A (11-12 months) Soleus muscle C3KO
GSM838944 A (11-12 months) Soleus muscle C3KO
GSM838943 A (11-12 months) Quadriceps muscle C3KO
GSM838940 A (11-12 months) Quadriceps muscle wild-type
GSM838939 A (11-12 months) Soleus muscle wild-type
GSM838940 A (11-12 months) Quadriceps muscle wild-type
GSM838940 A (11-12 months) Quadriceps muscle wild-type
GSM838943 A (11-12 months) Quadriceps muscle C3KO
GSM838939 A (11-12 months) Soleus muscle wild-type
GSM838940 A (11-12 months) Quadriceps muscle wild-type
GSM838939 A (11-12 months) Soleus muscle wild-type
GSM838940 A (11-12 months) Quadriceps muscle wild-type
GSM838939 A (11-12 months) Soleus muscle wild-type
GSM838963 Y (2-3 months) Quadriceps muscle C3KO
GSM838964 Y (2-3 months) Soleus muscle C3KO
GSM838963 Y (2-3 months) Quadriceps muscle C3KO
GSM838964 Y (2-3 months) Soleus muscle C3KO
GSM838944 A (11-12 months) Soleus muscle C3KO
GSM838968 Y (2-3 months) Quadriceps muscle wild-type
GSM838969 Y (2-3 months) Soleus muscle wild-type
GSM838968 Y (2-3 months) Quadriceps muscle wild-type
GSM838969 Y (2-3 months) Soleus muscle wild-type
GSM838968 Y (2-3 months) Quadriceps muscle wild-type
GSM838969 Y (2-3 months) Soleus muscle wild-type
GSM838968 Y (2-3 months) Quadriceps muscle wild-type
GSM838969 Y (2-3 months) Soleus muscle wild-type
GSM838963 Y (2-3 months) Quadriceps muscle C3KO
GSM838964 Y (2-3 months) Soleus muscle C3KO
GSM838943 A (11-12 months) Quadriceps muscle C3KO
GSM838963 Y (2-3 months) Quadriceps muscle C3KO
GSM838964 Y (2-3 months) Soleus muscle C3KO

Tags

  • muscle
  • soleus

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