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Home › Dataset Library › Expression data from mouse muscle

Dataset: Expression data from mouse muscle

The knock-out of calpain 3 (C3KO) is a murine model for calpainopathies wich shows a mild dystrophic phenotype with signs of muscle...

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The knock-out of calpain 3 (C3KO) is a murine model for calpainopathies wich shows a mild dystrophic phenotype with signs of muscle degeneration. Adult (A) mice show a more severe phenotype than young (Y) mice which only present inflammatory infiltrates in most severely affected muscles, such as the soleus. Other muscles (e.g. quadriceps) are much less affected. We used microarray technology to compare gene expression profiles of young and adult muscles in wild-type (wt) and C3KO mice, in two types of muscle: soleus (affected) and quadriceps (much less affected). 11 wt (7 adult and 4 young) and 11 C3KO (7 adult and 4 young) mice were used in this study for RNA extraction and hybridization on Affymetrix microarrays. The soleus and the quadriceps muscles were obtained from each mouse. All mice were males.

Species:
mouse

Samples:
42

Source:
E-GEOD-33931

Updated:
Dec.12, 2014

Registered:
Nov.12, 2014


Factors: (via ArrayExpress)
Sample AGE VARIATION ORGANISM PART
GSM838939 A (11-12 months) wild-type Soleus muscle
GSM838940 A (11-12 months) wild-type Quadriceps muscle
GSM838940 A (11-12 months) wild-type Quadriceps muscle
GSM838939 A (11-12 months) wild-type Soleus muscle
GSM838943 A (11-12 months) C3KO Quadriceps muscle
GSM838944 A (11-12 months) C3KO Soleus muscle
GSM838943 A (11-12 months) C3KO Quadriceps muscle
GSM838944 A (11-12 months) C3KO Soleus muscle
GSM838943 A (11-12 months) C3KO Quadriceps muscle
GSM838944 A (11-12 months) C3KO Soleus muscle
GSM838943 A (11-12 months) C3KO Quadriceps muscle
GSM838944 A (11-12 months) C3KO Soleus muscle
GSM838944 A (11-12 months) C3KO Soleus muscle
GSM838943 A (11-12 months) C3KO Quadriceps muscle
GSM838940 A (11-12 months) wild-type Quadriceps muscle
GSM838939 A (11-12 months) wild-type Soleus muscle
GSM838940 A (11-12 months) wild-type Quadriceps muscle
GSM838940 A (11-12 months) wild-type Quadriceps muscle
GSM838943 A (11-12 months) C3KO Quadriceps muscle
GSM838939 A (11-12 months) wild-type Soleus muscle
GSM838940 A (11-12 months) wild-type Quadriceps muscle
GSM838939 A (11-12 months) wild-type Soleus muscle
GSM838940 A (11-12 months) wild-type Quadriceps muscle
GSM838939 A (11-12 months) wild-type Soleus muscle
GSM838963 Y (2-3 months) C3KO Quadriceps muscle
GSM838964 Y (2-3 months) C3KO Soleus muscle
GSM838963 Y (2-3 months) C3KO Quadriceps muscle
GSM838964 Y (2-3 months) C3KO Soleus muscle
GSM838944 A (11-12 months) C3KO Soleus muscle
GSM838968 Y (2-3 months) wild-type Quadriceps muscle
GSM838969 Y (2-3 months) wild-type Soleus muscle
GSM838968 Y (2-3 months) wild-type Quadriceps muscle
GSM838969 Y (2-3 months) wild-type Soleus muscle
GSM838968 Y (2-3 months) wild-type Quadriceps muscle
GSM838969 Y (2-3 months) wild-type Soleus muscle
GSM838968 Y (2-3 months) wild-type Quadriceps muscle
GSM838969 Y (2-3 months) wild-type Soleus muscle
GSM838963 Y (2-3 months) C3KO Quadriceps muscle
GSM838964 Y (2-3 months) C3KO Soleus muscle
GSM838943 A (11-12 months) C3KO Quadriceps muscle
GSM838963 Y (2-3 months) C3KO Quadriceps muscle
GSM838964 Y (2-3 months) C3KO Soleus muscle

Tags

  • muscle
  • soleus

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