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Home › Dataset Library › Tag: Bone

Dataset: Gene expression profile in MCF7 breast cancer cells after 78 functionallly important molecules were knocked down using siRNA.

Affymetrix microarray data was generated from MCF7 breast cancer cells treated in vitro with siRNAs against 78 transcription factors and...

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Affymetrix microarray data was generated from MCF7 breast cancer cells treated in vitro with siRNAs against 78 transcription factors and signalling molecules. Gene expresion of 78 functionally important molecules were knocked down in MCF7 breast cancer cells using siRNA. Then the gene expression profiles of these MCF7 cells, along with untreated cells and non-targetting control (SICONTROL) treated cells were analysed using microarrays.

Species:
human

Samples:
89

Source:
E-GEOD-31912

Updated:
Dec.12, 2014

Registered:
Sep.16, 2014


Factors: (via ArrayExpress)
Sample KNOCKED OUT GENE
GSM791013 ABL1
GSM791014 AKT1
GSM791015 ARHGEF1
GSM791016 ATR
GSM791017 BCL2
GSM791018 BCL6
GSM791019 BRCA1
GSM791020 BRCA2
GSM79102 CCL5
GSM791022 CCNA2
GSM791023 CCNB1
GSM791024 CCND3
GSM791025 CCNG2
GSM791026 CDC16
GSM791027 CDC2
GSM791028 CDC20
GSM791029 CDC25A
GSM791030 CDC25B
GSM79103 CDC34
GSM791032 CDK2
GSM791033 CDK4
GSM791034 CDKN2A
GSM791035 CEBPA
GSM791036 CEBPB
GSM791037 CEBPD
GSM791038 CENPE
GSM791039 CENPF
GSM791040 CHEK1
GSM79104 CREBBP
GSM791042 CTNNB1
GSM791043 E2F1
GSM791044 E2F5
GSM791045 ERBB2
GSM791046 ERF
GSM791047 ESR1
GSM791047 ESR1
GSM791049 ESRRA
GSM791050 FOS
GSM79105 FOXC1
GSM791052 FOXJ2
GSM791053 FOXO1A
GSM791054 FOXO3A
GSM791055 FOXP1
GSM791056 GATA3
GSM791057 HDAC3
GSM791058 HDAC5
GSM791059 HIF1A
GSM791060 HOXB7
GSM79106 HSF2
GSM791062 ID1
GSM791063 JUN
GSM791064 JUND
GSM791065 MAPK1
GSM791066 MAPK14
GSM791067 MAX
GSM791068 MCM2
GSM791069 MYBL2
GSM791070 MYC
GSM79107 NCOR2
GSM791072 NFKB1
GSM791072 NFKB1
GSM791072 NFKB1
GSM791075 NMI
GSM791076 PAX3
GSM791076 PAX3
GSM791078 PCNA
GSM791079 PIAS
GSM791080 POLR2A
GSM791080 POLR2A
GSM791082 RB1
GSM791083 RBL2
GSM791084 RELA
GSM791085 none
GSM791085 none
GSM791085 none
GSM791088 SKP2
GSM791089 SLC2A3
GSM791090 SMAD7
GSM79109 SP100
GSM791092 STAT1
GSM791093 STAT5B
GSM791094 TCEA1
GSM791095 TEL2
GSM791095 TEL2
GSM791097 TOP2A
GSM791098 TP53
GSM791085 none
GSM791085 none
GSM791085 none

Tags

  • breast
  • breast cancer
  • cancer

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