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Home › Dataset Library › Knock-down and Over-expression of JMJD6 in MCF-7 and/or MDA-MB231

Dataset: Knock-down and Over-expression of JMJD6 in MCF-7 and/or MDA-MB231

By survival analysis of breast cancer patients, JMJD6 was found to be significantly associated with poor prognosis. Over-expression and...

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By survival analysis of breast cancer patients, JMJD6 was found to be significantly associated with poor prognosis. Over-expression and knock-down of JMJD6 in breast cancer cell lines suggested a role in proliferation. In order to study the transcriptional events that occur following JMJD6 expression changes, siRNA-mediated knock-down of JMJD6 was performed in MCF-7 and MDA-MB231 and stable over-expression of JMJD6 was performed in MCF-7. There are 2 different siRNA-mediated knock-downs of JMJD6 with 2 biological replicates in MCF-7 and MDA-MB231; 3 clones of JMJD6 over-expression with 3 biological replicates in MCF-7. The control for the knock-downs is scrambled siRNA-treated MCF-7 and MDA-MB231 and the control for JMJD6 over-expression is empty vector over-expression in MCF-7.

Species:
human

Samples:
28

Source:
E-GEOD-31782

Updated:
Dec.12, 2014

Registered:
Sep.16, 2014


Factors: (via ArrayExpress)
Sample CELL LINE JMJD6 EXPRESSION
GSM788456 MDA-MB231 Knock-down
GSM788457 MDA-MB231 Control (scrambled siRNA)
GSM788456 MDA-MB231 Knock-down
GSM788457 MDA-MB231 Control (scrambled siRNA)
GSM788456 MDA-MB231 Knock-down
GSM788457 MDA-MB231 Control (scrambled siRNA)
GSM788456 MDA-MB231 Knock-down
GSM788457 MDA-MB231 Control (scrambled siRNA)
GSM788464 MCF-7 Knock-down
GSM788465 MCF-7 Control (scrambled siRNA)
GSM788464 MCF-7 Knock-down
GSM788465 MCF-7 Control (scrambled siRNA)
GSM788464 MCF-7 Knock-down
GSM788465 MCF-7 Control (scrambled siRNA)
GSM788464 MCF-7 Knock-down
GSM788465 MCF-7 Control (scrambled siRNA)
GSM788472 MCF-7 Over-expressed
GSM788472 MCF-7 Over-expressed
GSM788472 MCF-7 Over-expressed
GSM788475 MCF-7 Control (empty vector)
GSM788472 MCF-7 Over-expressed
GSM788472 MCF-7 Over-expressed
GSM788472 MCF-7 Over-expressed
GSM788475 MCF-7 Control (empty vector)
GSM788472 MCF-7 Over-expressed
GSM788472 MCF-7 Over-expressed
GSM788472 MCF-7 Over-expressed
GSM788475 MCF-7 Control (empty vector)

Tags

  • breast
  • breast cancer
  • cancer
  • cell

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