Dataset: UMCCC Primary Lung Cancer Specimens

Develop an EGFR mutation gene expression signature to aid in predicting response and clinical outcome and to identify genes associated...

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Develop an EGFR mutation gene expression signature to aid in predicting response and clinical outcome and to identify genes associated with the EGFR-dependent phenotype 17 primary lung adenocarcinomas were analyzed with Affymetrix U133-plus2

Species:: human
Samples:: 17
Source:: E-GEOD-31546
Updated:: Dec.12, 2014
Registered:: Sep.16, 2014

Factors: (via ArrayExpress)

Sample	FIRST PROGRESSION OR RELAPSE	ADJUVANT CHEMO	VITAL STATUS	MONTHS TO FIRST PROGRESSION	GENDER	ADJUVANT RX	MONTHS TO LAST CLINICAL ASSESSMENT	HISTOLOGIC GRADE	RACE	PATHOLOGIC N STAGE	EGFR STATUS	PATHOLOGIC T STAGE	SMOKING HISTORY	MONTHS TO LAST CONTACT OR DEATH	LABORATORY BATCH
GSM782960	No	No	alive	not specified	female	No	25.2	WELL DIFFERENTIATED	White	N0, ACCORDING TO AJCC CRITERIA	Wild-Type	T1, ACCORDING TO AJCC CRITERIA	Smoked in the past	25.2	12
GSM78296	No	No	alive	not specified	female	No	69.2	WELL DIFFERENTIATED	Unknown	N0, ACCORDING TO AJCC CRITERIA	Wild-Type	T1, ACCORDING TO AJCC CRITERIA	Never smoked	69.2	12
GSM782962	Yes	No	alive	42.5	female	No	83	WELL DIFFERENTIATED	White	N0, ACCORDING TO AJCC CRITERIA	Wild-Type	T1, ACCORDING TO AJCC CRITERIA	Smoked in the past	83	12
GSM782963	Yes	No	alive	30	female	No	69.2	WELL DIFFERENTIATED	White	N0, ACCORDING TO AJCC CRITERIA	Wild-Type	T1, ACCORDING TO AJCC CRITERIA	Smoked in the past	69.2	12
GSM782964	Yes	No	alive	3	female	No	27.1	WELL DIFFERENTIATED	White	N0, ACCORDING TO AJCC CRITERIA	Wild-Type	T1, ACCORDING TO AJCC CRITERIA	Smoked in the past	27.1	12
GSM782965	Yes	Yes	alive	9	female	Yes	66.6	Moderate Differentiation	Asian	N0, ACCORDING TO AJCC CRITERIA	Mutant	T2, ACCORDING TO AJCC CRITERIA	Never smoked	66.6	13
GSM782966	Yes	No	dead	not specified	female	No	128.8	Moderate Differentiation	White	N0, ACCORDING TO AJCC CRITERIA	Mutant	T1, ACCORDING TO AJCC CRITERIA	Smoked in the past	128.8	14
GSM782967	No	No	alive	not specified	male	No	62	Moderate Differentiation	White	N0, ACCORDING TO AJCC CRITERIA	Wild-Type	T2, ACCORDING TO AJCC CRITERIA	Smoked in the past	62	15
GSM782968	No	No	alive	not specified	female	No	52.1	WELL DIFFERENTIATED	White	N0, ACCORDING TO AJCC CRITERIA	Mutant	T1, ACCORDING TO AJCC CRITERIA	Smoked in the past	52.1	16
GSM782969	No	No	alive	not specified	female	No	86.8	WELL DIFFERENTIATED	White	N0, ACCORDING TO AJCC CRITERIA	Mutant	T1, ACCORDING TO AJCC CRITERIA	Smoked in the past	86.8	16
GSM782970	Yes	No	alive	102	male	No	103.4	Moderate Differentiation	Unknown	N0, ACCORDING TO AJCC CRITERIA	Mutant	T2, ACCORDING TO AJCC CRITERIA	Smoked in the past	103.4	16
GSM78297	No	No	alive	not specified	female	No	162.6	WELL DIFFERENTIATED	White	N0, ACCORDING TO AJCC CRITERIA	Wild-Type	T1, ACCORDING TO AJCC CRITERIA	Smoked in the past	162.6	16
GSM782972	No	No	alive	not specified	male	No	101.2	Moderate Differentiation	White	N0, ACCORDING TO AJCC CRITERIA	Wild-Type	T2, ACCORDING TO AJCC CRITERIA	Smoked in the past	101.2	17
GSM782973	No	Yes	alive	not specified	female	Yes	32.9	Moderate Differentiation	Not Reported	N1, ACCORDING TO AJCC CRITERIA	Mutant	T2, ACCORDING TO AJCC CRITERIA	Never smoked	32.9	18
GSM782974	Yes	Yes	dead	27	female	Yes	54.2	Moderate Differentiation	Not Reported	N0, ACCORDING TO AJCC CRITERIA	Mutant	T1, ACCORDING TO AJCC CRITERIA	Never smoked	54.2	18
GSM782975	Yes	No	alive	10	female	No	53.2	Moderate Differentiation	White	N0, ACCORDING TO AJCC CRITERIA	Mutant	T1, ACCORDING TO AJCC CRITERIA	Smoked in the past	53.2	18
GSM782976	not specified	not specified	not specified	not specified	female	not specified	not specified	not specified	not specified	not specified	Wild-Type	not specified	not specified	not specified	not specified