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Home › Dataset Library › Microarray expression analysis of patients Dupuytren´s contracture (DC)

Dataset: Microarray expression analysis of patients Dupuytren´s contracture (DC)

We used a high-throughput technology, DNA microarray, to screen the entire genome for the changes in gene expression in diseased tissue...

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We used a high-throughput technology, DNA microarray, to screen the entire genome for the changes in gene expression in diseased tissue to characterize Dupuytren's contracture at a molecular level and find genes that are involved in development of the disease. Primary cell cultures were established from surgically removed diseased (D) and healthy (ND) tissue from 3 patients. Total we had 6 samples, 3 diseased and 3 healthy patient-matched samples. Total RNA was isolated by RNeasy mini kit (Qiagen) and further used for microarray expression analysis (HG-U133A array, Affymetrix). Raw data, CEL. files were analysed with software MAS5, GeneSpring and GENEMAPP.

Species:
human

Samples:
6

Source:
E-GEOD-31356

Updated:
Dec.12, 2014

Registered:
Jun.18, 2014


Factors: (via ArrayExpress)
Sample TISSUE ORIGIN
GSM777508 macroscopically unaffected fascia tissue from the edge of primary incision (ND)
GSM777507 palmar fascia localized in palmodigital and digital area (D)
GSM777508 macroscopically unaffected fascia tissue from the edge of primary incision (ND)
GSM777507 palmar fascia localized in palmodigital and digital area (D)
GSM777508 macroscopically unaffected fascia tissue from the edge of primary incision (ND)
GSM777507 palmar fascia localized in palmodigital and digital area (D)

Tags

  • cell
  • disease
  • genome

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