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Home › Dataset Library › Developmental profiling of spiral ganglion neurons reveals insights into auditory circuit assembly

Dataset: Developmental profiling of spiral ganglion neurons reveals insights into auditory circuit assembly

The sense of hearing depends on the faithful transmission of sound information from the ear to the brain by spiral ganglion (SG) neurons....

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The sense of hearing depends on the faithful transmission of sound information from the ear to the brain by spiral ganglion (SG) neurons. However, how SG neurons develop the connections and properties that underlie auditory processing is largely unknown. We catalogued gene expression in mouse SG neurons at six developmental stages, ranging from embryonic day 12 (E12), when SG neurons first extend projections, up until postnatal day 15 (P15), after the onset of hearing. For comparison, we also analyzed the closely-related vestibular ganglion (VG) at the same time points. To identify genes involved in SG axon guidance and branching, target selection, synaptogenesis, synaptic refinement, and synaptic function, we collected SG at E12 and E13, E16, P0, P6, and P15. We also collected VG at the same time points. For E12 and E13 time points, SG and VG were microdissected from Rnx-cre; Z/EG embryos, which express GFP in the VG. E16-P15 VG was also isolated by microdissection from Rnx-cre; Z/EG animals. E16-P15 SG neurons were isolated by FACS sorting dissociated cochlea from Mafb-GFP animals.

Species:
mouse

Samples:
40

Source:
E-GEOD-29766

Updated:
Dec.12, 2014

Registered:
Nov.11, 2014


Factors: (via ArrayExpress)
Sample EXTRACTION PROCEDURE TISSUE DEVELOPMENT STAGE GENOTYPE/VARIATION
GSM737978 microdissected spiral ganglion E12 Rnx-cre; Z/EG
GSM737978 microdissected spiral ganglion E12 Rnx-cre; Z/EG
GSM737978 microdissected spiral ganglion E12 Rnx-cre; Z/EG
GSM73798 microdissected spiral ganglion E13 Rnx-cre; Z/EG
GSM73798 microdissected spiral ganglion E13 Rnx-cre; Z/EG
GSM73798 microdissected spiral ganglion E13 Rnx-cre; Z/EG
GSM737984 FACS sorted spiral ganglion E16 CD1 X MafB-GFP-/+
GSM737984 FACS sorted spiral ganglion E16 CD1 X MafB-GFP-/+
GSM737984 FACS sorted spiral ganglion E16 CD1 X MafB-GFP-/+
GSM737984 FACS sorted spiral ganglion E16 CD1 X MafB-GFP-/+
GSM737988 FACS sorted spiral ganglion P0 CD1 X MafB-GFP-/+
GSM737988 FACS sorted spiral ganglion P0 CD1 X MafB-GFP-/+
GSM737988 FACS sorted spiral ganglion P0 CD1 X MafB-GFP-/+
GSM737988 FACS sorted spiral ganglion P0 CD1 X MafB-GFP-/+
GSM737992 FACS sorted spiral ganglion P6 CD1 X MafB-GFP-/+
GSM737992 FACS sorted spiral ganglion P6 CD1 X MafB-GFP-/+
GSM737992 FACS sorted spiral ganglion P6 CD1 X MafB-GFP-/+
GSM737992 FACS sorted spiral ganglion P6 CD1 X MafB-GFP-/+
GSM737996 FACS sorted spiral ganglion P15 CD1 X MafB-GFP-/+
GSM737996 FACS sorted spiral ganglion P15 CD1 X MafB-GFP-/+
GSM737996 FACS sorted spiral ganglion P15 CD1 X MafB-GFP-/+
GSM737996 FACS sorted spiral ganglion P15 CD1 X MafB-GFP-/+
GSM738000 microdissected vestibular ganglion E12 Rnx-cre; Z/EG
GSM738000 microdissected vestibular ganglion E12 Rnx-cre; Z/EG
GSM738000 microdissected vestibular ganglion E12 Rnx-cre; Z/EG
GSM738003 microdissected vestibular ganglion E13 Rnx-cre; Z/EG
GSM738003 microdissected vestibular ganglion E13 Rnx-cre; Z/EG
GSM738003 microdissected vestibular ganglion E13 Rnx-cre; Z/EG
GSM738006 microdissected vestibular ganglion E16 Rnx-cre; Z/EG
GSM738006 microdissected vestibular ganglion E16 Rnx-cre; Z/EG
GSM738006 microdissected vestibular ganglion E16 Rnx-cre; Z/EG
GSM738009 microdissected vestibular ganglion P0 Rnx-cre; Z/EG
GSM738009 microdissected vestibular ganglion P0 Rnx-cre; Z/EG
GSM738009 microdissected vestibular ganglion P0 Rnx-cre; Z/EG
GSM738012 microdissected vestibular ganglion P6 Rnx-cre; Z/EG
GSM738012 microdissected vestibular ganglion P6 Rnx-cre; Z/EG
GSM738012 microdissected vestibular ganglion P6 Rnx-cre; Z/EG
GSM738015 microdissected vestibular ganglion P15 Rnx-cre; Z/EG
GSM738015 microdissected vestibular ganglion P15 Rnx-cre; Z/EG
GSM738015 microdissected vestibular ganglion P15 Rnx-cre; Z/EG

Tags

  • axon
  • brain
  • cochlea
  • ear
  • ganglion
  • spiral
  • vestibular ganglion

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