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Home › Dataset Library › Developmental profiling of spiral ganglion neurons reveals insights into auditory circuit assembly

Dataset: Developmental profiling of spiral ganglion neurons reveals insights into auditory circuit assembly

The sense of hearing depends on the faithful transmission of sound information from the ear to the brain by spiral ganglion (SG) neurons....

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The sense of hearing depends on the faithful transmission of sound information from the ear to the brain by spiral ganglion (SG) neurons. However, how SG neurons develop the connections and properties that underlie auditory processing is largely unknown. We catalogued gene expression in mouse SG neurons at six developmental stages, ranging from embryonic day 12 (E12), when SG neurons first extend projections, up until postnatal day 15 (P15), after the onset of hearing. For comparison, we also analyzed the closely-related vestibular ganglion (VG) at the same time points. To identify genes involved in SG axon guidance and branching, target selection, synaptogenesis, synaptic refinement, and synaptic function, we collected SG at E12 and E13, E16, P0, P6, and P15. We also collected VG at the same time points. For E12 and E13 time points, SG and VG were microdissected from Rnx-cre; Z/EG embryos, which express GFP in the VG. E16-P15 VG was also isolated by microdissection from Rnx-cre; Z/EG animals. E16-P15 SG neurons were isolated by FACS sorting dissociated cochlea from Mafb-GFP animals.

Species:
mouse

Samples:
40

Source:
E-GEOD-29766

Updated:
Dec.12, 2014

Registered:
Nov.11, 2014


Factors: (via ArrayExpress)
Sample DEVELOPMENT STAGE TISSUE EXTRACTION PROCEDURE GENOTYPE/VARIATION
GSM737978 E12 spiral ganglion microdissected Rnx-cre; Z/EG
GSM737978 E12 spiral ganglion microdissected Rnx-cre; Z/EG
GSM737978 E12 spiral ganglion microdissected Rnx-cre; Z/EG
GSM73798 E13 spiral ganglion microdissected Rnx-cre; Z/EG
GSM73798 E13 spiral ganglion microdissected Rnx-cre; Z/EG
GSM73798 E13 spiral ganglion microdissected Rnx-cre; Z/EG
GSM737984 E16 spiral ganglion FACS sorted CD1 X MafB-GFP-/+
GSM737984 E16 spiral ganglion FACS sorted CD1 X MafB-GFP-/+
GSM737984 E16 spiral ganglion FACS sorted CD1 X MafB-GFP-/+
GSM737984 E16 spiral ganglion FACS sorted CD1 X MafB-GFP-/+
GSM737988 P0 spiral ganglion FACS sorted CD1 X MafB-GFP-/+
GSM737988 P0 spiral ganglion FACS sorted CD1 X MafB-GFP-/+
GSM737988 P0 spiral ganglion FACS sorted CD1 X MafB-GFP-/+
GSM737988 P0 spiral ganglion FACS sorted CD1 X MafB-GFP-/+
GSM737992 P6 spiral ganglion FACS sorted CD1 X MafB-GFP-/+
GSM737992 P6 spiral ganglion FACS sorted CD1 X MafB-GFP-/+
GSM737992 P6 spiral ganglion FACS sorted CD1 X MafB-GFP-/+
GSM737992 P6 spiral ganglion FACS sorted CD1 X MafB-GFP-/+
GSM737996 P15 spiral ganglion FACS sorted CD1 X MafB-GFP-/+
GSM737996 P15 spiral ganglion FACS sorted CD1 X MafB-GFP-/+
GSM737996 P15 spiral ganglion FACS sorted CD1 X MafB-GFP-/+
GSM737996 P15 spiral ganglion FACS sorted CD1 X MafB-GFP-/+
GSM738000 E12 vestibular ganglion microdissected Rnx-cre; Z/EG
GSM738000 E12 vestibular ganglion microdissected Rnx-cre; Z/EG
GSM738000 E12 vestibular ganglion microdissected Rnx-cre; Z/EG
GSM738003 E13 vestibular ganglion microdissected Rnx-cre; Z/EG
GSM738003 E13 vestibular ganglion microdissected Rnx-cre; Z/EG
GSM738003 E13 vestibular ganglion microdissected Rnx-cre; Z/EG
GSM738006 E16 vestibular ganglion microdissected Rnx-cre; Z/EG
GSM738006 E16 vestibular ganglion microdissected Rnx-cre; Z/EG
GSM738006 E16 vestibular ganglion microdissected Rnx-cre; Z/EG
GSM738009 P0 vestibular ganglion microdissected Rnx-cre; Z/EG
GSM738009 P0 vestibular ganglion microdissected Rnx-cre; Z/EG
GSM738009 P0 vestibular ganglion microdissected Rnx-cre; Z/EG
GSM738012 P6 vestibular ganglion microdissected Rnx-cre; Z/EG
GSM738012 P6 vestibular ganglion microdissected Rnx-cre; Z/EG
GSM738012 P6 vestibular ganglion microdissected Rnx-cre; Z/EG
GSM738015 P15 vestibular ganglion microdissected Rnx-cre; Z/EG
GSM738015 P15 vestibular ganglion microdissected Rnx-cre; Z/EG
GSM738015 P15 vestibular ganglion microdissected Rnx-cre; Z/EG

Tags

  • axon
  • brain
  • cochlea
  • ear
  • ganglion
  • spiral
  • vestibular ganglion

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