Dataset: Transcription profiling by array of human HT29 colorectal adenocarcinoma cells after treatment with apratoxin A

Total RNA was extracted from apratoxin A or vehicle treated HT29 cells using the RNeasy Mini Kit (Qiagen). Probe values from CEL files...

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Total RNA was extracted from apratoxin A or vehicle treated HT29 cells using the RNeasy Mini Kit (Qiagen). Probe values from CEL files were condensed to probe sets using Rosetta Resolver software. Resolver ANOVA analysis was then performed between groups. Experiment Overall Design: 2 doses were compared to vehicle at 3 time points. Each time point had its own vehicle control

Species:: human
Samples:: 27
Source:: E-GEOD-2742
PubMed:: 16474387
Updated:: Dec.12, 2014
Registered:: Jun.19, 2014

Factors: (via ArrayExpress)

Sample	compound	time	irradiate	temperature	dose
GSE2742GSM92821	none	12		42
GSE2742GSM60137	apratoxin A	6		37	0.01
GSE2742GSM92819	hydrogen peroxide	12		37	100
GSE2742GSM60134	none	6		37
GSE2742GSM60139	none	12		37
GSE2742GSM60134	none	6		37
GSE2742GSM92819	hydrogen peroxide	12		37	100
GSE2742GSM60132	apratoxin A	3		37	0.01
GSE2742GSM60137	apratoxin A	6		37	0.01
GSE2742GSM60141	apratoxin A	12		37	0.002
GSE2742GSM60136	apratoxin A	6		37	0.002
GSE2742GSM60141	apratoxin A	12		37	0.002
GSE2742GSM60139	none	12		37
GSE2742GSM60132	apratoxin A	3		37	0.01
GSE2742GSM60129	apratoxin A	3		37	0.002
GSE2742GSM92821	none	12		42
GSE2742GSM60139	none	12		37
GSE2742GSM60128	none	3		37
GSE2742GSM60136	apratoxin A	6		37	0.002
GSE2742GSM60139	none	12		37
GSE2742GSM60129	apratoxin A	3		37	0.002
GSE2742GSM60128	none	3		37
GSE2742GSM60143	apratoxin A	12		37	0.01
GSE2742GSM60143	apratoxin A	12		37	0.01
GSE2742GSM92822	none	12	ultraviolet light 50 joules per square meter	37
GSE2742GSM92815	none	12	ultraviolet light 200 joules per square meter	37
GSE2742GSM92822	none	12	ultraviolet light 50 joules per square meter	37