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Home › Dataset Library › Analysis of Human Tendinopathy Gene Expression

Dataset: Analysis of Human Tendinopathy Gene Expression

Chronic tendon injuries, also known as tendinopathy, are common among professional and recreational athletes. These injuries result in a...

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Chronic tendon injuries, also known as tendinopathy, are common among professional and recreational athletes. These injuries result in a significant amount of morbidity and health care expenditure and yet little is known about the molecular mechanism leading to tendinopathy. We have used histological evaluation and molecular profiling to determine the gene expression changes in 23 human patients undergoing surgical procedures for the treatment of chronic tendinopathy. Diseased tendons have altered extracellular matrix, fiber disorientation, increased cellular content and vasculature and the absence of inflammatory cells. Global gene expression profiling identified 1783 transcripts with significant different expression patterns in the diseased tendons. Global pathway analysis further suggests altered expression of extracellular matrix proteins and the lack of an appreciable inflammatory response. We have identified pathways and genes regulated in tendinopathy samples that will help contribute to the understanding of the disease towards the development of novel therapeutics. A prospective study was initiated to collect tissue from patients undergoing surgery as standard of care for tendinopathy. Biopsies (~3mm^3) of diseased tendons as well as a section of grossly normal appearing tendon were collected from 23 patients. Written informed consent was obtained from all patients prior to any study related procedure.

Species:
human

Samples:
46

Source:
E-GEOD-26051

PubMed:
21539748

Updated:
Dec.12, 2014

Registered:
Sep.15, 2014


Factors: (via ArrayExpress)
Sample DISEASE STATE GENDER AGE TISSUE DONOR
GSM639748 Non-lesional Male 45 Tendon;Brachialis 5
GSM639749 Non-lesional Male 48 Tendon;EDC 9
GSM639750 Non-lesional Male 41 Tendon;Quadriceps 10
GSM63975 Non-lesional Male 62 Tendon;Flexor-Pronator 12
GSM639752 Non-lesional Female 62 Tendon;Subscapularis 13
GSM639753 Non-lesional Male 32 Tendon;Patellar 15
GSM639754 Non-lesional Female 61 Tendon;Subscapularis 16
GSM639755 Non-lesional Male 59 Tendon;Subscapularis 17
GSM639756 Non-lesional Male 45 Tendon;Flexor-Pronator 19
GSM639757 Non-lesional Female 63 Tendon;Subscapularis 20
GSM639758 Non-lesional Female 65 Tendon;Biceps 21
GSM639759 Non-lesional Female 64 Tendon;Subscapularis 23
GSM639760 Non-lesional Male 50 Tendon;Biceps 24
GSM63976 Non-lesional Male 55 Tendon;ECRB 26
GSM639762 Non-lesional Male 50 Tendon;Subscapularis 27
GSM639763 Non-lesional Male 41 Tendon;Biceps 28
GSM639764 Non-lesional Male 46 Tendon;Biceps 29
GSM639765 Non-lesional Male 52 Tendon;ECRL 30
GSM639766 Non-lesional Male 66 Tendon;Subscapularis 31
GSM639767 Non-lesional Female 46 Tendon;Teres minor 32
GSM639768 Non-lesional Male 44 Tendon;Subscapularis 33
GSM639769 Non-lesional Female 59 Tendon;Biceps 34
GSM639770 Non-lesional Female 49 Tendon;Subscapularis 35
GSM63977 Lesional Male 45 Tendon;Biceps 5
GSM639772 Lesional Male 48 Tendon;ECRB 9
GSM639773 Lesional Male 41 Tendon;Patellar 10
GSM639774 Lesional Male 62 Tendon;Flexor-Pronator 12
GSM639775 Lesional Female 62 Tendon;Suspraspinatus 13
GSM639776 Lesional Male 32 Tendon;Patellar 15
GSM639777 Lesional Female 61 Tendon;Suspraspinatus 16
GSM639778 Lesional Male 59 Tendon;Suspraspinatus 17
GSM639779 Lesional Male 45 Tendon;Flexor-Pronator 19
GSM639780 Lesional Female 63 Tendon;Suspraspinatus 20
GSM63978 Lesional Female 65 Tendon;Suspraspinatus 21
GSM639782 Lesional Female 64 Tendon;Suspraspinatus 23
GSM639783 Lesional Male 50 Tendon;Suspraspinatus 24
GSM639784 Lesional Male 55 Tendon;ECRB 26
GSM639785 Lesional Male 50 Tendon;Suspraspinatus 27
GSM639786 Lesional Male 41 Tendon;Suspraspinatus 28
GSM639787 Lesional Male 46 Tendon;Suspraspinatus 29
GSM639788 Lesional Male 52 Tendon;ECRB 30
GSM639789 Lesional Male 66 Tendon;Suspraspinatus 31
GSM639790 Lesional Female 46 Tendon;Suspraspinatus 32
GSM63979 Lesional Male 44 Tendon;Suspraspinatus 33
GSM639792 Lesional Female 59 Tendon;Suspraspinatus 34
GSM639793 Lesional Female 49 Tendon;Suspraspinatus 35

Tags

  • disease
  • fiber
  • tendon
  • vasculature

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