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Home › Dataset Library › Analysis of Human Tendinopathy Gene Expression

Dataset: Analysis of Human Tendinopathy Gene Expression

Chronic tendon injuries, also known as tendinopathy, are common among professional and recreational athletes. These injuries result in a...

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Chronic tendon injuries, also known as tendinopathy, are common among professional and recreational athletes. These injuries result in a significant amount of morbidity and health care expenditure and yet little is known about the molecular mechanism leading to tendinopathy. We have used histological evaluation and molecular profiling to determine the gene expression changes in 23 human patients undergoing surgical procedures for the treatment of chronic tendinopathy. Diseased tendons have altered extracellular matrix, fiber disorientation, increased cellular content and vasculature and the absence of inflammatory cells. Global gene expression profiling identified 1783 transcripts with significant different expression patterns in the diseased tendons. Global pathway analysis further suggests altered expression of extracellular matrix proteins and the lack of an appreciable inflammatory response. We have identified pathways and genes regulated in tendinopathy samples that will help contribute to the understanding of the disease towards the development of novel therapeutics. A prospective study was initiated to collect tissue from patients undergoing surgery as standard of care for tendinopathy. Biopsies (~3mm^3) of diseased tendons as well as a section of grossly normal appearing tendon were collected from 23 patients. Written informed consent was obtained from all patients prior to any study related procedure.

Species:
human

Samples:
46

Source:
E-GEOD-26051

PubMed:
21539748

Updated:
Dec.12, 2014

Registered:
Sep.15, 2014


Factors: (via ArrayExpress)
Sample DISEASE STATE DONOR AGE TISSUE GENDER
GSM639748 Non-lesional 5 45 Tendon;Brachialis Male
GSM639749 Non-lesional 9 48 Tendon;EDC Male
GSM639750 Non-lesional 10 41 Tendon;Quadriceps Male
GSM63975 Non-lesional 12 62 Tendon;Flexor-Pronator Male
GSM639752 Non-lesional 13 62 Tendon;Subscapularis Female
GSM639753 Non-lesional 15 32 Tendon;Patellar Male
GSM639754 Non-lesional 16 61 Tendon;Subscapularis Female
GSM639755 Non-lesional 17 59 Tendon;Subscapularis Male
GSM639756 Non-lesional 19 45 Tendon;Flexor-Pronator Male
GSM639757 Non-lesional 20 63 Tendon;Subscapularis Female
GSM639758 Non-lesional 21 65 Tendon;Biceps Female
GSM639759 Non-lesional 23 64 Tendon;Subscapularis Female
GSM639760 Non-lesional 24 50 Tendon;Biceps Male
GSM63976 Non-lesional 26 55 Tendon;ECRB Male
GSM639762 Non-lesional 27 50 Tendon;Subscapularis Male
GSM639763 Non-lesional 28 41 Tendon;Biceps Male
GSM639764 Non-lesional 29 46 Tendon;Biceps Male
GSM639765 Non-lesional 30 52 Tendon;ECRL Male
GSM639766 Non-lesional 31 66 Tendon;Subscapularis Male
GSM639767 Non-lesional 32 46 Tendon;Teres minor Female
GSM639768 Non-lesional 33 44 Tendon;Subscapularis Male
GSM639769 Non-lesional 34 59 Tendon;Biceps Female
GSM639770 Non-lesional 35 49 Tendon;Subscapularis Female
GSM63977 Lesional 5 45 Tendon;Biceps Male
GSM639772 Lesional 9 48 Tendon;ECRB Male
GSM639773 Lesional 10 41 Tendon;Patellar Male
GSM639774 Lesional 12 62 Tendon;Flexor-Pronator Male
GSM639775 Lesional 13 62 Tendon;Suspraspinatus Female
GSM639776 Lesional 15 32 Tendon;Patellar Male
GSM639777 Lesional 16 61 Tendon;Suspraspinatus Female
GSM639778 Lesional 17 59 Tendon;Suspraspinatus Male
GSM639779 Lesional 19 45 Tendon;Flexor-Pronator Male
GSM639780 Lesional 20 63 Tendon;Suspraspinatus Female
GSM63978 Lesional 21 65 Tendon;Suspraspinatus Female
GSM639782 Lesional 23 64 Tendon;Suspraspinatus Female
GSM639783 Lesional 24 50 Tendon;Suspraspinatus Male
GSM639784 Lesional 26 55 Tendon;ECRB Male
GSM639785 Lesional 27 50 Tendon;Suspraspinatus Male
GSM639786 Lesional 28 41 Tendon;Suspraspinatus Male
GSM639787 Lesional 29 46 Tendon;Suspraspinatus Male
GSM639788 Lesional 30 52 Tendon;ECRB Male
GSM639789 Lesional 31 66 Tendon;Suspraspinatus Male
GSM639790 Lesional 32 46 Tendon;Suspraspinatus Female
GSM63979 Lesional 33 44 Tendon;Suspraspinatus Male
GSM639792 Lesional 34 59 Tendon;Suspraspinatus Female
GSM639793 Lesional 35 49 Tendon;Suspraspinatus Female

Tags

  • disease
  • fiber
  • tendon
  • vasculature

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