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Dataset: Global gene expression profiles and the progression of pro- and anti-inflammatory pathways in mouse models

Gaucher Disease (GD) is caused by defective glucocerebrosidase (GCase) activity and the consequent accumulation of its substrate,...

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Gaucher Disease (GD) is caused by defective glucocerebrosidase (GCase) activity and the consequent accumulation of its substrate, glucosylceramide (GC). This excess of accumulation of GC leads to broad functional impairments in multiple organs, but the pathogenic pathways leading to lipid laden macrophages (Gaucher cells) in visceral organs and their abnormal function is obscure. To understand the molecular pathogenesis of GD, developmental global gene expression was conducted by microarray analyses of total mRNAs from lung and liver of two distinct GCase point-mutated mice (V394L/V394L and D409V/null) and genetic background matched wild-type controls. INFg regulated pro-inflammatory and IL-4 regulated anti-inflammatory cytokine/mediator network were constructed in the lung and liver of GCase mutant mice. Progressive alterations of the INFg and IL-4 pathways were similar, but to different degrees, in visceral tissues from the two different GCase mutated mice. These analyses implicate IFNg regulated pro-inflammatory and IL-4 regulated anti-inflammatory networks in the differential pathophysiological progression. In order to understand the molecular pathogenesis of GD, the disease progression in those models were inverstigated in two visceral tissues (lung and liver) at four time points according to the genotypes. 9V/null: 4 weeks (4w), 12 weeks (12w), 18 weeks (18w), 28 weeks (28w); 4L: weeks (4w), 12 weeks (12w), 18 weeks (18w), 28 weeks (28w). The data from those models were analyzed relative to the adult wild type at 28 weeks.

Species:
mouse

Samples:
39

Source:
E-GEOD-23408

Updated:
Dec.12, 2014

Registered:
Nov.11, 2014


Factors: (via ArrayExpress)
Sample AGE TISSUE GENOTYPE/VARIATION
GSM574130 4 weeks lung D409V/null
GSM574130 4 weeks lung D409V/null
GSM574132 12 weeks lung D409V/null
GSM574132 12 weeks lung D409V/null
GSM574134 18 weeks lung D409V/null
GSM574134 18 weeks lung D409V/null
GSM574136 28 weeks lung D409V/null
GSM574136 28 weeks lung D409V/null
GSM574138 4 weeks liver D409V/null
GSM574138 4 weeks liver D409V/null
GSM574140 12 weeks liver D409V/null
GSM574140 12 weeks liver D409V/null
GSM574142 18 weeks liver D409V/null
GSM574142 18 weeks liver D409V/null
GSM574144 28 weeks liver D409V/null
GSM574144 28 weeks liver D409V/null
GSM574146 4 weeks lung V394L/V394L
GSM574146 4 weeks lung V394L/V394L
GSM574148 12 weeks lung V394L/V394L
GSM574148 12 weeks lung V394L/V394L
GSM574150 18 weeks lung V394L/V394L
GSM574150 18 weeks lung V394L/V394L
GSM574152 28 weeks lung V394L/V394L
GSM574152 28 weeks lung V394L/V394L
GSM574154 4 weeks liver V394L/V394L
GSM574154 4 weeks liver V394L/V394L
GSM574156 12 weeks liver V394L/V394L
GSM574156 12 weeks liver V394L/V394L
GSM574158 18 weeks liver V394L/V394L
GSM574158 18 weeks liver V394L/V394L
GSM574160 28 weeks liver V394L/V394L
GSM574160 28 weeks liver V394L/V394L
GSM574162 28 weeks lung wild-type
GSM574162 28 weeks lung wild-type
GSM574162 28 weeks lung wild-type
GSM574162 28 weeks lung wild-type
GSM574166 28 weeks liver wild-type
GSM574166 28 weeks liver wild-type
GSM574166 28 weeks liver wild-type

Tags

  • cytokine
  • disease
  • gaucher disease
  • glucosylceramide
  • lipid
  • liver
  • lung
  • point

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