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Dataset: Expression data from human NHL cell lines treated with agonistic antibodies

CD20 is a clinically validated target for Non-Hodgkin’s lymphomas and autoimmune diseases. Interactions of CD20 with the B cell receptor...

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CD20 is a clinically validated target for Non-Hodgkin’s lymphomas and autoimmune diseases. Interactions of CD20 with the B cell receptor (BCR) and components of the BCR signaling cascade have been reported. In this study we show that antibodies against CD20 or activation of the BCR by specific antibodies induce very similar expression patterns of up- or down-regulated genes in NHL cell lines indicating that CD20 may play a role in BCR signaling and vice versa. We used microarray data to show that antibodies against CD20 or activation of the BCR by specific antibodies induce very similar expression patterns of up- or down-regulated genes in NHL cell lines indicating that CD20 may play a role in BCR signaling and vice versa. Four different cell lines were treated with various antibodies for 4h (3 replicates per treatment), all in all 96 arrays were analysed for 32 samples. Changes were calculated relative to control/reference experiments. Expression patterns of each treatment were compared to determine overlaps.

Species:
human

Samples:
96

Source:
E-GEOD-23394

PubMed:
21364752

Updated:
Dec.12, 2014

Registered:
Jul.12, 2014


Factors: (via ArrayExpress)
Sample CELL LINE TREATMENT DOSE
GSM573797 Z-138 anti-IgG 10
GSM573797 Z-138 anti-IgG 10
GSM573797 Z-138 anti-IgG 10
GSM573794 Z-138 control 0
GSM573794 Z-138 control 0
GSM573794 Z-138 control 0
GSM57379 Oci-Ly18 anti-IgG 10
GSM57379 Oci-Ly18 anti-IgG 10
GSM57379 Oci-Ly18 anti-IgG 10
GSM573788 Oci-Ly18 control 0
GSM573788 Oci-Ly18 control 0
GSM573788 Oci-Ly18 control 0
GSM573785 SU-DHL4 control 0
GSM573785 SU-DHL4 control 0
GSM573785 SU-DHL4 control 0
GSM573782 SU-DHL4 anti-IgG 10
GSM573782 SU-DHL4 anti-IgG 10
GSM573782 SU-DHL4 anti-IgG 10
GSM573779 Rec-1 anti-IgM_Fab2 10
GSM573779 Rec-1 anti-IgM_Fab2 10
GSM573779 Rec-1 anti-IgM_Fab2 10
GSM573776 Rec-1 Rituximab_Fab2 10
GSM573776 Rec-1 Rituximab_Fab2 10
GSM573776 Rec-1 Rituximab_Fab2 10
GSM573773 Rec-1 anti-IgG 10
GSM573773 Rec-1 anti-IgG 10
GSM573773 Rec-1 anti-IgG 10
GSM573770 Rec-1 Rituximab 10
GSM573770 Rec-1 Rituximab 10
GSM573770 Rec-1 Rituximab 10
GSM573767 Rec-1 LT20 10
GSM573767 Rec-1 LT20 10
GSM573767 Rec-1 LT20 10
GSM573764 Rec-1 anti-IgM 10
GSM573764 Rec-1 anti-IgM 10
GSM573764 Rec-1 anti-IgM 10
GSM57376 Rec-1 Isotype_Human_IgG 10
GSM57376 Rec-1 Isotype_Human_IgG 10
GSM57376 Rec-1 Isotype_Human_IgG 10
GSM573758 Rec-1 control 0
GSM573758 Rec-1 control 0
GSM573758 Rec-1 control 0
GSM573755 Z-138 anti-IgM_Fab2 10
GSM573755 Z-138 anti-IgM_Fab2 10
GSM573755 Z-138 anti-IgM_Fab2 10
GSM573752 Z-138 anti-IgM 10
GSM573752 Z-138 anti-IgM 10
GSM573752 Z-138 anti-IgM 10
GSM573749 Z-138 LT20 10
GSM573749 Z-138 LT20 10
GSM573749 Z-138 LT20 10
GSM573746 Z-138 Rituximab 10
GSM573746 Z-138 Rituximab 10
GSM573746 Z-138 Rituximab 10
GSM573743 Z-138 Isotype_Human_IgG 10
GSM573743 Z-138 Isotype_Human_IgG 10
GSM573743 Z-138 Isotype_Human_IgG 10
GSM573794 Z-138 control 0
GSM573794 Z-138 control 0
GSM573794 Z-138 control 0
GSM573737 Oci-Ly18 anti-IgM_Fab2 10
GSM573737 Oci-Ly18 anti-IgM_Fab2 10
GSM573737 Oci-Ly18 anti-IgM_Fab2 10
GSM573734 Oci-Ly18 anti-IgM 10
GSM573734 Oci-Ly18 anti-IgM 10
GSM573734 Oci-Ly18 anti-IgM 10
GSM57373 Oci-Ly18 LT20 10
GSM57373 Oci-Ly18 LT20 10
GSM57373 Oci-Ly18 LT20 10
GSM573728 Oci-Ly18 Rituximab 10
GSM573728 Oci-Ly18 Rituximab 10
GSM573728 Oci-Ly18 Rituximab 10
GSM573725 Oci-Ly18 Isotype_Human_IgG 10
GSM573725 Oci-Ly18 Isotype_Human_IgG 10
GSM573725 Oci-Ly18 Isotype_Human_IgG 10
GSM573788 Oci-Ly18 control 0
GSM573788 Oci-Ly18 control 0
GSM573788 Oci-Ly18 control 0
GSM573719 SU-DHL4 anti-IgM_Fab2 10
GSM573719 SU-DHL4 anti-IgM_Fab2 10
GSM573719 SU-DHL4 anti-IgM_Fab2 10
GSM573716 SU-DHL4 anti-IgM 10
GSM573716 SU-DHL4 anti-IgM 10
GSM573716 SU-DHL4 anti-IgM 10
GSM573713 SU-DHL4 LT20 10
GSM573713 SU-DHL4 LT20 10
GSM573713 SU-DHL4 LT20 10
GSM573710 SU-DHL4 Rituximab 10
GSM573710 SU-DHL4 Rituximab 10
GSM573710 SU-DHL4 Rituximab 10
GSM573707 SU-DHL4 Isotype_Human_IgG 10
GSM573707 SU-DHL4 Isotype_Human_IgG 10
GSM573707 SU-DHL4 Isotype_Human_IgG 10
GSM573785 SU-DHL4 control 0
GSM573785 SU-DHL4 control 0
GSM573785 SU-DHL4 control 0

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