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Home › Dataset Library › Gene expression in retina and LGN of wild type and Chrnb2-/- mice

Dataset: Gene expression in retina and LGN of wild type and Chrnb2-/- mice

Mice lacking the beta 2 subunit (Chrnb2) of the neuronal nicotinic acetylcholine receptor display altered retinal waves and disorganized...

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Mice lacking the beta 2 subunit (Chrnb2) of the neuronal nicotinic acetylcholine receptor display altered retinal waves and disorganized projections of the retinal ganglion cells to the lateral geniculate nucleus (LGN). mRNA populations from retinas and LGN from Chrnb2-/-and wild type (C57BL/6J) mice were compared at 4 days postnatal, when RGC segregation to the LGN begins in WT mice. Retinal mRNAs were also compared at adulthood. Using microarray hybridization, we identified transcripts which are differentially expressed between Chrnb2-/- and wild type animals in these two tissues at these two ages. mRNA was isolated from retina and LGN of three male littermates each of WT and Chrnb2-/- mice at P4. mRNA from retinas of two adult male littermates of each type was also examined.

Species:
mouse

Samples:
24

Source:
E-GEOD-22824

Updated:
Dec.12, 2014

Registered:
Nov.11, 2014


Factors: (via ArrayExpress)
Sample MOUSE TISSUE MUTANT ALLELE DEVELOPMENTAL STAGE GENOTYPE/VARIATION
GSM564240 left and right total retinas Picciotto Postnatal day 4 (before retinal ganglion cell segregation in lateral geniculate nucleus) Chrnb2-/- (verified by PCR from tail snip, parents are Picciotto mutant)
GSM564240 left and right total retinas Picciotto Postnatal day 4 (before retinal ganglion cell segregation in lateral geniculate nucleus) Chrnb2-/- (verified by PCR from tail snip, parents are Picciotto mutant)
GSM564240 left and right total retinas Picciotto Postnatal day 4 (before retinal ganglion cell segregation in lateral geniculate nucleus) Chrnb2-/- (verified by PCR from tail snip, parents are Picciotto mutant)
GSM564243 left and right total retinas Xu Postnatal day 4 (before retinal ganglion cell segregation in lateral geniculate nucleus) Chrnb2-/- (verified by PCR from tail snip, parents are Xu mutant)
GSM564243 left and right total retinas Xu Postnatal day 4 (before retinal ganglion cell segregation in lateral geniculate nucleus) Chrnb2-/- (verified by PCR from tail snip, parents are Xu mutant)
GSM564243 left and right total retinas Xu Postnatal day 4 (before retinal ganglion cell segregation in lateral geniculate nucleus) Chrnb2-/- (verified by PCR from tail snip, parents are Xu mutant)
GSM564246 left and right total retinas not specified Postnatal day 4 (before retinal ganglion cell segregation in lateral geniculate nucleus) wild type
GSM564246 left and right total retinas not specified Postnatal day 4 (before retinal ganglion cell segregation in lateral geniculate nucleus) wild type
GSM564246 left and right total retinas not specified Postnatal day 4 (before retinal ganglion cell segregation in lateral geniculate nucleus) wild type
GSM564249 left and right total lateral geniculate nucleus (LGN) Picciotto Postnatal day 4 (before retinal ganglion cell segregation in lateral geniculate nucleus) Chrnb2-/- (verified by PCR from tail snip, parents are Picciotto mutant)
GSM564249 left and right total lateral geniculate nucleus (LGN) Picciotto Postnatal day 4 (before retinal ganglion cell segregation in lateral geniculate nucleus) Chrnb2-/- (verified by PCR from tail snip, parents are Picciotto mutant)
GSM564249 left and right total lateral geniculate nucleus (LGN) Picciotto Postnatal day 4 (before retinal ganglion cell segregation in lateral geniculate nucleus) Chrnb2-/- (verified by PCR from tail snip, parents are Picciotto mutant)
GSM564252 left and right total lateral geniculate nucleus (LGN) Xu Postnatal day 4 (before retinal ganglion cell segregation in lateral geniculate nucleus) Chrnb2-/- (verified by PCR from tail snip, parents are Xu mutant)
GSM564252 left and right total lateral geniculate nucleus (LGN) Xu Postnatal day 4 (before retinal ganglion cell segregation in lateral geniculate nucleus) Chrnb2-/- (verified by PCR from tail snip, parents are Xu mutant)
GSM564252 left and right total lateral geniculate nucleus (LGN) Xu Postnatal day 4 (before retinal ganglion cell segregation in lateral geniculate nucleus) Chrnb2-/- (verified by PCR from tail snip, parents are Xu mutant)
GSM564255 left and right total lateral geniculate nucleus (LGN) not specified Postnatal day 4 (before retinal ganglion cell segregation in lateral geniculate nucleus) wild type
GSM564255 left and right total lateral geniculate nucleus (LGN) not specified Postnatal day 4 (before retinal ganglion cell segregation in lateral geniculate nucleus) wild type
GSM564255 left and right total lateral geniculate nucleus (LGN) not specified Postnatal day 4 (before retinal ganglion cell segregation in lateral geniculate nucleus) wild type
GSM564258 1542 left and right total retinas Picciotto Adult (after retinal ganglion cell segregation in lateral geniculate nucleus is complete) Chrnb2-/- (verified by PCR from tail snip, parents are Picciotto mutant)
GSM564259 1543 left and right total retinas Picciotto Adult (after retinal ganglion cell segregation in lateral geniculate nucleus is complete) Chrnb2-/- (verified by PCR from tail snip, parents are Picciotto mutant)
GSM564260 77 left and right total retinas Xu Adult (after retinal ganglion cell segregation in lateral geniculate nucleus is complete) Chrnb2-/- (verified by PCR from tail snip, parents are Xu mutant)
GSM56426 78 left and right total retinas Xu Adult (after retinal ganglion cell segregation in lateral geniculate nucleus is complete) Chrnb2-/- (verified by PCR from tail snip, parents are Xu mutant)
GSM564262 748 left and right total retinas not specified Adult (after retinal ganglion cell segregation in lateral geniculate nucleus is complete) wild type
GSM564263 763 left and right total retinas not specified Adult (after retinal ganglion cell segregation in lateral geniculate nucleus is complete) wild type

Tags

  • acetylcholine
  • acetylcholine receptor
  • ganglion
  • lateral
  • nicotinic acetylcholine receptor
  • retina

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