BioGPS
  • Home
  • Help
  • Plugins
  • Datasets
  • Sign Up
  • Login
Examples: Gene Symbol(s), Gene Ontology, Splicing plugins, Melanoma datasets
advanced
Home › Dataset Library › Transcription profiling by array of human estrogen receptor alpha positive breast tumors with and without PIK3CA mutations.

Dataset: Transcription profiling by array of human estrogen receptor alpha positive breast tumors with and without PIK3CA mutations.

PI3K/AKT pathway plays one of pivotal roles in breast cancer development and maintenance. PIK3CA, coding PIK3 catalytic subunit, is the...

Registered by ArrayExpress Uploader
View Dataset

PI3K/AKT pathway plays one of pivotal roles in breast cancer development and maintenance. PIK3CA, coding PIK3 catalytic subunit, is the oncogene which shows the high frequency of gain-of-function mutations leading to the PI3K/AKT pathway activation in breast cancer. In particular in the ERα-positive breast tumors PIK3CA mutations have been observed in 30% to 40%. However, genes expressed in connection to the pathway activation in breast tumorigenesis remain largely unknown. To identify downstream relevant target genes (and signaling pathways) turned on by the aberrant PI3K/AKT signal in breast tumors, we analyzed gene expression by pangenomic oligonucleotide microarray in a series of 43 ERα-positive tumors with and without PIK3CA mutations. 43 ERα-positive breast tumors including 14 tumors with PIK3CA mutations and 29 tumors without PIK3CA mutattions were used as screening set for microarray.

Species:
human

Samples:
43

Source:
E-GEOD-22035

PubMed:
21209903

Updated:
Dec.12, 2014

Registered:
Sep.15, 2014


Factors: (via ArrayExpress)
Sample genotype
GSM547768 estrogen receptor alpha mutation: positive; PIK3CA mutation: negative
GSM547768 estrogen receptor alpha mutation: positive; PIK3CA mutation: negative
GSM547768 estrogen receptor alpha mutation: positive; PIK3CA mutation: negative
GSM547768 estrogen receptor alpha mutation: positive; PIK3CA mutation: negative
GSM547772 estrogen receptor alpha mutation: positive; PIK3CA mutation: positive
GSM547772 estrogen receptor alpha mutation: positive; PIK3CA mutation: positive
GSM547772 estrogen receptor alpha mutation: positive; PIK3CA mutation: positive
GSM547772 estrogen receptor alpha mutation: positive; PIK3CA mutation: positive
GSM547768 estrogen receptor alpha mutation: positive; PIK3CA mutation: negative
GSM547772 estrogen receptor alpha mutation: positive; PIK3CA mutation: positive
GSM547772 estrogen receptor alpha mutation: positive; PIK3CA mutation: positive
GSM547768 estrogen receptor alpha mutation: positive; PIK3CA mutation: negative
GSM547768 estrogen receptor alpha mutation: positive; PIK3CA mutation: negative
GSM547768 estrogen receptor alpha mutation: positive; PIK3CA mutation: negative
GSM547768 estrogen receptor alpha mutation: positive; PIK3CA mutation: negative
GSM547772 estrogen receptor alpha mutation: positive; PIK3CA mutation: positive
GSM547768 estrogen receptor alpha mutation: positive; PIK3CA mutation: negative
GSM547768 estrogen receptor alpha mutation: positive; PIK3CA mutation: negative
GSM547768 estrogen receptor alpha mutation: positive; PIK3CA mutation: negative
GSM547768 estrogen receptor alpha mutation: positive; PIK3CA mutation: negative
GSM547768 estrogen receptor alpha mutation: positive; PIK3CA mutation: negative
GSM547768 estrogen receptor alpha mutation: positive; PIK3CA mutation: negative
GSM547768 estrogen receptor alpha mutation: positive; PIK3CA mutation: negative
GSM547768 estrogen receptor alpha mutation: positive; PIK3CA mutation: negative
GSM547772 estrogen receptor alpha mutation: positive; PIK3CA mutation: positive
GSM547768 estrogen receptor alpha mutation: positive; PIK3CA mutation: negative
GSM547772 estrogen receptor alpha mutation: positive; PIK3CA mutation: positive
GSM547768 estrogen receptor alpha mutation: positive; PIK3CA mutation: negative
GSM547768 estrogen receptor alpha mutation: positive; PIK3CA mutation: negative
GSM547768 estrogen receptor alpha mutation: positive; PIK3CA mutation: negative
GSM547768 estrogen receptor alpha mutation: positive; PIK3CA mutation: negative
GSM547772 estrogen receptor alpha mutation: positive; PIK3CA mutation: positive
GSM547772 estrogen receptor alpha mutation: positive; PIK3CA mutation: positive
GSM547768 estrogen receptor alpha mutation: positive; PIK3CA mutation: negative
GSM547768 estrogen receptor alpha mutation: positive; PIK3CA mutation: negative
GSM547768 estrogen receptor alpha mutation: positive; PIK3CA mutation: negative
GSM547768 estrogen receptor alpha mutation: positive; PIK3CA mutation: negative
GSM547768 estrogen receptor alpha mutation: positive; PIK3CA mutation: negative
GSM547772 estrogen receptor alpha mutation: positive; PIK3CA mutation: positive
GSM547772 estrogen receptor alpha mutation: positive; PIK3CA mutation: positive
GSM547768 estrogen receptor alpha mutation: positive; PIK3CA mutation: negative
GSM547772 estrogen receptor alpha mutation: positive; PIK3CA mutation: positive
GSM547768 estrogen receptor alpha mutation: positive; PIK3CA mutation: negative

Tags

  • breast
  • breast cancer
  • cancer

Other Formats

JSON    XML
  • About
  • Blog
  • Help
  • FAQ
  • Downloads
  • API
  • iPhone App
  • Email updates
© 2025 The Scripps Research Institute. All rights reserved. (ver 94eefe6 )
  • Terms of Use