Dataset: Effects of gene scilencing of USP2 on expression profiles of HL60 cells
So far, we have found PMA induced USP2b isoform in myeloid leukemia cell lines such as HL60, THP-1, and U937. To explore molecular...
So far, we have found PMA induced USP2b isoform in myeloid leukemia cell lines such as HL60, THP-1, and U937. To explore molecular function of USP2 in the cells, we assess expression profiles of HL60-derivatives continuously expressing shRNA for USP2 and control shRNA. HL60 derivatives continuously expressing shRNA for USP2 and control shRNA were treated with PMA (30nM) for 0, 1, 2, and 3 days. Total RNA was extracted from the cells and subjected to microarray experiments using Human Genome U133 GeneChips.
- Species:
- human
- Samples:
- 24
- Source:
- E-GEOD-20476
- Updated:
- Dec.12, 2014
- Registered:
- Jul.12, 2014
Factors:
(via ArrayExpress)
Sample | DURATION | TRANSDUCTION | PRETREATMENTDOSE |
---|---|---|---|
GSM513728 | 3 days | negative control shRNA | 32nM |
GSM513728 | 3 days | negative control shRNA | 32nM |
GSM513728 | 3 days | negative control shRNA | 32nM |
GSM513725 | 2 days | negative control shRNA | 32nM |
GSM513725 | 2 days | negative control shRNA | 32nM |
GSM513725 | 2 days | negative control shRNA | 32nM |
GSM513722 | 1 day | negative control shRNA | 32nM |
GSM513722 | 1 day | negative control shRNA | 32nM |
GSM513722 | 1 day | negative control shRNA | 32nM |
GSM513719 | 0 day | negative control shRNA | 0nM |
GSM513719 | 0 day | negative control shRNA | 0nM |
GSM513719 | 0 day | negative control shRNA | 0nM |
GSM513716 | 3 days | USP2 shRNA | 32nM |
GSM513716 | 3 days | USP2 shRNA | 32nM |
GSM513716 | 3 days | USP2 shRNA | 32nM |
GSM513713 | 2 days | USP2 shRNA | 32nM |
GSM513713 | 2 days | USP2 shRNA | 32nM |
GSM513713 | 2 days | USP2 shRNA | 32nM |
GSM513710 | 1 day | USP2 shRNA | 32nM |
GSM513710 | 1 day | USP2 shRNA | 32nM |
GSM513710 | 1 day | USP2 shRNA | 32nM |
GSM513707 | 0 day | USP2 shRNA | 0nM |
GSM513707 | 0 day | USP2 shRNA | 0nM |
GSM513707 | 0 day | USP2 shRNA | 0nM |