BioGPS
  • Home
  • Help
  • Plugins
  • Datasets
  • Sign Up
  • Login
Examples: Gene Symbol(s), Gene Ontology, Splicing plugins, Melanoma datasets
advanced
Home › Dataset Library › Hepatocellular carcinomas (HCC) in mice transduced in utero with feline immunodeficiency virus-based vectors (expression)

Dataset: Hepatocellular carcinomas (HCC) in mice transduced in utero with feline immunodeficiency virus-based vectors (expression)

Fetal mice (16 days gestation) were administered feline immunodeficiency virus (FIV)-based lentiviral viral particles containing the gene...

Registered by ArrayExpress Uploader
View Dataset

Fetal mice (16 days gestation) were administered feline immunodeficiency virus (FIV)-based lentiviral viral particles containing the gene encoding GFP. Six liver tumors developed in three mice between the ages of 273 and 484 days, each mouse developed 2 tumors. These tumors and non-tumorous liver tissue from the same animals and animals that did not develop tumors and untransduced controls were harvested and microarrays were performed on total RNA extracted from these samples. We were interested in investigating the link between lentiviral integration and gene expression. Keywords: Comparison of HCC with non-tumorous liver tissue adjacent to tumor. Fourteen samples were analyzed in total: Two tumors from each of three mice (6 samples); surrounding non-tumorous liver tissue from each of these three mice (3 samples); two female mice and one male mouse that were transduced and did not develop tumors (3 samples); one female and one male untransduced mouse (2 samples). The samples were performed in two runs: one containing the samples from female mice and the second containing samples from male mice.

Species:
mouse

Samples:
14

Source:
E-GEOD-19306

PubMed:
23982166

Updated:
Dec.12, 2014

Registered:
Nov.24, 2014


Factors: (via ArrayExpress)
Sample MOUSE DEVELOPED TUMORS AGE SEX ORGANISM PART FIV-TRANSDUCED
GSM479809 yes 433 days male liver yes
GSM479810 yes 433 days male liver tumor yes
GSM479810 yes 433 days male liver tumor yes
GSM479812 no 677 days male liver yes
GSM479813 not specified unknown male unknown, liver no
GSM479814 yes 484 days female liver tumor yes
GSM479815 yes 273 days female liver yes
GSM479816 no 341 days female liver yes
GSM479817 not specified unknown female unknown, liver no
GSM479818 yes 484 days female liver yes
GSM479814 yes 484 days female liver tumor yes
GSM479820 yes 273 days female liver tumor yes
GSM479820 yes 273 days female liver tumor yes
GSM479822 no 715 days female liver yes

Tags

  • hcc
  • liver

Other Formats

JSON    XML
  • About
  • Blog
  • Help
  • FAQ
  • Downloads
  • API
  • iPhone App
  • Email updates
© 2026 The Scripps Research Institute. All rights reserved. (ver 94eefe6 )
  • Terms of Use