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Home › Dataset Library › Gene expression associated with lentiviral expression of PRAME in normal hematopoietic progenitors.

Dataset: Gene expression associated with lentiviral expression of PRAME in normal hematopoietic progenitors.

To identify gene expression that distinguishes hematopoietic cells that express PRAME from those that do not, normal CD34+ cells with...

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To identify gene expression that distinguishes hematopoietic cells that express PRAME from those that do not, normal CD34+ cells with forced PRAME expression were compared to cells without PRAME expression in culture over time (days 4, 7, 14) using Affymetrix HU-133A microarrays Normal CD34+ progenitor cells not expressing PRAME were transduced with either PRAME cDNA (no 3' utr) or a corresponding empty vector control by lentiviral vector infection. Two replicates were performed for each condition (PRAME and control) at three experimental time points (days 4, 7, and 14 in culture). A single-stranded linear amplification protocol was used to process total RNA (one microgram) for the microarrays. This protocols is described in detail in PMID 14706461.

Species:
human

Samples:
12

Source:
E-GEOD-17100

PubMed:
19625708

Updated:
Dec.12, 2014

Registered:
Jun.19, 2014


Factors: (via ArrayExpress)
Sample TIME POINT REPLICATE CONDITION
GSM427827 day 14 in culture PRAME
GSM427827 day 14 in culture PRAME
GSM427825 day 14 in culture control
GSM427825 day 14 in culture control
GSM427823 day 7 in culture PRAME
GSM427823 day 7 in culture PRAME
GSM42782 day 7 in culture control
GSM42782 day 7 in culture control
GSM427819 day 4 in culture PRAME
GSM427819 day 4 in culture PRAME
GSM427817 day 4 in culture control
GSM427817 day 4 in culture control

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