Dataset: Gene expression associated with lentiviral expression of PRAME in normal hematopoietic progenitors.
To identify gene expression that distinguishes hematopoietic cells that express PRAME from those that do not, normal CD34+ cells with...
To identify gene expression that distinguishes hematopoietic cells that express PRAME from those that do not, normal CD34+ cells with forced PRAME expression were compared to cells without PRAME expression in culture over time (days 4, 7, 14) using Affymetrix HU-133A microarrays Normal CD34+ progenitor cells not expressing PRAME were transduced with either PRAME cDNA (no 3' utr) or a corresponding empty vector control by lentiviral vector infection. Two replicates were performed for each condition (PRAME and control) at three experimental time points (days 4, 7, and 14 in culture). A single-stranded linear amplification protocol was used to process total RNA (one microgram) for the microarrays. This protocols is described in detail in PMID 14706461.
- Species:
- human
- Samples:
- 12
- Source:
- E-GEOD-17100
- PubMed:
- 19625708
- Updated:
- Dec.12, 2014
- Registered:
- Jun.19, 2014
Sample | TIME POINT | REPLICATE | CONDITION |
---|---|---|---|
GSM427827 | day 14 in culture | PRAME | |
GSM427827 | day 14 in culture | PRAME | |
GSM427825 | day 14 in culture | control | |
GSM427825 | day 14 in culture | control | |
GSM427823 | day 7 in culture | PRAME | |
GSM427823 | day 7 in culture | PRAME | |
GSM42782 | day 7 in culture | control | |
GSM42782 | day 7 in culture | control | |
GSM427819 | day 4 in culture | PRAME | |
GSM427819 | day 4 in culture | PRAME | |
GSM427817 | day 4 in culture | control | |
GSM427817 | day 4 in culture | control |