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Home › Dataset Library › Gene expression profiling of human gliomas and human glioblastoma cell lines

Dataset: Gene expression profiling of human gliomas and human glioblastoma cell lines

To identify signaling pathways that are differentially regulated in human gliomas, a microarray analysis on 30 brain tumor samples (12...

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To identify signaling pathways that are differentially regulated in human gliomas, a microarray analysis on 30 brain tumor samples (12 primary glioblastomas (GBM), 3 secondary glioblastomas (GBM-2), 8 astrocytomas (Astro) and 7 oligodendrogliomas (Oligo)) and on 5 glioblastoma cell lines (LN018, LN215, LN229, LN319 and BS149) was performed. Normal brain tissue (NB) and normal human astrocytes (NHA) were used as a control. Kinase expression in each tumor was compared to expression in normal brain and expression values from normal human astrocytes were used as an additional control. Keywords: Kinase expression in each tumor was compared to expression in normal brain and expression values from normal human astrocytes were used as an additional control. Frozen tissue samples of human gliomas and normal brain obtained from the operating room were processed according to the guidelines of the Ethical Committee of the University Hospitals of Basel. Human brain tumor cell lines were derived from human patients. The BS149 cell line was generated at the University of Basel, Switzerland while the “LN” series were a kind gift of Erwin van Meir in Lausanne, Switzerland. Normal human astrocytes (NHAs) were purchased by Cambrex (Walkersville, MD) and cultured according to manufacturer’s recommendations.

Species:
human

Samples:
45

Source:
E-GEOD-15824

PubMed:
21406405

Updated:
Dec.12, 2014

Registered:
Sep.12, 2014


Factors: (via ArrayExpress)
Sample GENDER AGE CELL LINE TISSUE CELL TYPE TUMOR GRADE
GSM397626 male 46 not specified primary brain tumor glioblastoma IV
GSM397627 male 40 not specified primary brain tumor glioblastoma IV
GSM397628 male 47 not specified primary brain tumor glioblastoma IV
GSM397629 male 44 not specified primary brain tumor glioblastoma IV
GSM397630 female 43 not specified primary brain tumor glioblastoma IV
GSM39763 male 52 not specified primary brain tumor glioblastoma IV
GSM397632 female 35 not specified primary brain tumor glioblastoma IV
GSM397633 male 70 not specified primary brain tumor glioblastoma IV
GSM397634 male 68 not specified primary brain tumor glioblastoma IV
GSM397635 female 69 not specified primary brain tumor glioblastoma IV
GSM397636 male 69 not specified primary brain tumor glioblastoma IV
GSM397637 male 50 not specified primary brain tumor glioblastoma IV
GSM397638 male 43 not specified primary brain tumor astrocytoma AIII
GSM397639 male 37 not specified primary brain tumor astrocytoma AII
GSM397640 male 40 not specified primary brain tumor astrocytoma AII
GSM39764 male 47 not specified primary brain tumor astrocytoma AIII
GSM397642 male 41 not specified primary brain tumor astrocytoma AII
GSM397643 male 39 not specified primary brain tumor astrocytoma AII
GSM397644 male 44 not specified primary brain tumor astrocytoma AIII/IV
GSM397645 male 63 not specified primary brain tumor astrocytoma AIII
GSM397646 male 45 not specified primary brain tumor oligodendrioglioma OGIII
GSM397647 male 31 not specified primary brain tumor oligodendrioglioma OA
GSM397648 male 45 not specified primary brain tumor oligodendrioglioma OGII
GSM397649 male 33 not specified primary brain tumor oligodendrioglioma OGII
GSM397646 male 45 not specified primary brain tumor oligodendrioglioma OGIII
GSM397646 male 45 not specified primary brain tumor oligodendrioglioma OGIII
GSM397652 male 40 not specified primary brain tumor oligodendrioglioma OGII
GSM397653 female 64 not specified secondary brain tumor glioblastoma IV
GSM397654 male 13 not specified secondary brain tumor glioblastoma IV
GSM397655 female 40 not specified secondary brain tumor glioblastoma IV
GSM397656 not specified not specified not specified brain astrocytes not specified
GSM397656 not specified not specified not specified brain astrocytes not specified
GSM397656 not specified not specified not specified brain astrocytes not specified
GSM397659 not specified not specified not specified brain not specified not specified
GSM397659 not specified not specified not specified brain not specified not specified
GSM39766 not specified not specified LN018 not specified glioblastoma not specified
GSM39766 not specified not specified LN018 not specified glioblastoma not specified
GSM397663 not specified not specified LN215 not specified glioblastoma not specified
GSM397663 not specified not specified LN215 not specified glioblastoma not specified
GSM397665 not specified not specified LN229 not specified glioblastoma not specified
GSM397665 not specified not specified LN229 not specified glioblastoma not specified
GSM397667 not specified not specified LN319 not specified glioblastoma not specified
GSM397667 not specified not specified LN319 not specified glioblastoma not specified
GSM397669 not specified not specified BS149 not specified glioblastoma not specified
GSM397669 not specified not specified BS149 not specified glioblastoma not specified

Tags

  • brain
  • cell
  • gbm
  • line

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