Dataset: Transcription profiling by array of HUVEC cells after infection with H5N1 influenza virus
To delineate specific patterns of signaling networks activated by H5N1 we used a comparative systems biology approach analyzing gene...
To delineate specific patterns of signaling networks activated by H5N1 we used a comparative systems biology approach analyzing gene expression in endothelial cells infected with three different human and avian influenza strains of high and low pathogenicity. HUVECs were infected with either PR8, FPV or H5N1 virus. We used wildtype HUVEC or HUVEC transfected with a dominant negative mutant of IKK2 (block of the NF-kB signaling pathway).
- Species:
- human
- Samples:
- 30
- Source:
- E-GEOD-13637
- PubMed:
- 19786538
- Updated:
- Dec.12, 2014
- Registered:
- Sep.11, 2014
Factors:
(via ArrayExpress)
Sample | infect | genotype |
---|---|---|
GSM330313 | none | wild type |
GSM330314 | influenza A virus | wild type |
GSM330315 | PR8 influenza virus | wild type |
GSM330316 | H5N1 influenza virus | wild type |
GSM330313 | none | wild type |
GSM330314 | influenza A virus | wild type |
GSM330315 | PR8 influenza virus | wild type |
GSM330313 | none | wild type |
GSM330314 | influenza A virus | wild type |
GSM330315 | PR8 influenza virus | wild type |
GSM330316 | H5N1 influenza virus | wild type |
GSM335907 | H5N1 influenza virus | pEGZ-transfected (empty vector) |
GSM335907 | H5N1 influenza virus | pEGZ-transfected (empty vector) |
GSM335907 | H5N1 influenza virus | pEGZ-transfected (empty vector) |
GSM335910 | H5N1 influenza virus | IKK2kd-transfected |
GSM335910 | H5N1 influenza virus | IKK2kd-transfected |
GSM335910 | H5N1 influenza virus | IKK2kd-transfected |
GSM335913 | influenza A virus | pEGZ-transfected (empty vector) |
GSM335913 | influenza A virus | pEGZ-transfected (empty vector) |
GSM335913 | influenza A virus | pEGZ-transfected (empty vector) |
GSM330316 | H5N1 influenza virus | wild type |
GSM336560 | influenza A virus | IKK2kd-transfected |
GSM336560 | influenza A virus | IKK2kd-transfected |
GSM337460 | PR8 influenza virus | pEGZ-transfected (empty vector) |
GSM337460 | PR8 influenza virus | pEGZ-transfected (empty vector) |
GSM337460 | PR8 influenza virus | pEGZ-transfected (empty vector) |
GSM337464 | PR8 influenza virus | IKK2kd-transfected |
GSM337464 | PR8 influenza virus | IKK2kd-transfected |
GSM337464 | PR8 influenza virus | IKK2kd-transfected |
GSM336560 | influenza A virus | IKK2kd-transfected |