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Home › Dataset Library › Transcription profiling by array of HUVEC cells after infection with H5N1 influenza virus

Dataset: Transcription profiling by array of HUVEC cells after infection with H5N1 influenza virus

To delineate specific patterns of signaling networks activated by H5N1 we used a comparative systems biology approach analyzing gene...

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To delineate specific patterns of signaling networks activated by H5N1 we used a comparative systems biology approach analyzing gene expression in endothelial cells infected with three different human and avian influenza strains of high and low pathogenicity. HUVECs were infected with either PR8, FPV or H5N1 virus. We used wildtype HUVEC or HUVEC transfected with a dominant negative mutant of IKK2 (block of the NF-kB signaling pathway).

Species:
human

Samples:
30

Source:
E-GEOD-13637

PubMed:
19786538

Updated:
Dec.12, 2014

Registered:
Sep.11, 2014


Factors: (via ArrayExpress)
Sample infect genotype
GSM330313 none wild type
GSM330314 influenza A virus wild type
GSM330315 PR8 influenza virus wild type
GSM330316 H5N1 influenza virus wild type
GSM330313 none wild type
GSM330314 influenza A virus wild type
GSM330315 PR8 influenza virus wild type
GSM330313 none wild type
GSM330314 influenza A virus wild type
GSM330315 PR8 influenza virus wild type
GSM330316 H5N1 influenza virus wild type
GSM335907 H5N1 influenza virus pEGZ-transfected (empty vector)
GSM335907 H5N1 influenza virus pEGZ-transfected (empty vector)
GSM335907 H5N1 influenza virus pEGZ-transfected (empty vector)
GSM335910 H5N1 influenza virus IKK2kd-transfected
GSM335910 H5N1 influenza virus IKK2kd-transfected
GSM335910 H5N1 influenza virus IKK2kd-transfected
GSM335913 influenza A virus pEGZ-transfected (empty vector)
GSM335913 influenza A virus pEGZ-transfected (empty vector)
GSM335913 influenza A virus pEGZ-transfected (empty vector)
GSM330316 H5N1 influenza virus wild type
GSM336560 influenza A virus IKK2kd-transfected
GSM336560 influenza A virus IKK2kd-transfected
GSM337460 PR8 influenza virus pEGZ-transfected (empty vector)
GSM337460 PR8 influenza virus pEGZ-transfected (empty vector)
GSM337460 PR8 influenza virus pEGZ-transfected (empty vector)
GSM337464 PR8 influenza virus IKK2kd-transfected
GSM337464 PR8 influenza virus IKK2kd-transfected
GSM337464 PR8 influenza virus IKK2kd-transfected
GSM336560 influenza A virus IKK2kd-transfected

Tags

  • avian influenza
  • influenza

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