Dataset: Transcription profiling by array of human pulmonary MALT lymphoma tissue
Molecular pathways activated in MALT lymphoma are not well defined. In this study, we perform gene expression profiling on 35 pulmonary...
Molecular pathways activated in MALT lymphoma are not well defined. In this study, we perform gene expression profiling on 35 pulmonary MALT lymphoma using fresh frozen biopsy samples Experiment Overall Design: Total RNA was extracted from fresh frozen tisues of 35 newly diagnosed Pulmonary MALT, as defined by WHO classification, and hybridized to Affymetrix U133plus2 chip. Gene expression profile from other B and T cell malignancies and normal cellular and tissue counterpart were obtained from published dataset for comparison.
- Species:
- human
- Samples:
- 35
- Source:
- E-GEOD-13314
- PubMed:
- 18974375
- Updated:
- Dec.12, 2014
- Registered:
- Sep.11, 2014
Factors:
(via ArrayExpress)
| Sample | genotype | sex |
|---|---|---|
| GSM336017 | gene fusion: API2-MALT1 | male |
| GSM336018 | wild type | male |
| GSM336019 | wild type | female |
| GSM336019 | wild type | female |
| GSM336018 | wild type | male |
| GSM336019 | wild type | female |
| GSM336019 | wild type | female |
| GSM336017 | gene fusion: API2-MALT1 | male |
| GSM336018 | wild type | male |
| GSM336019 | wild type | female |
| GSM336019 | wild type | female |
| GSM336019 | wild type | female |
| GSM336019 | wild type | female |
| GSM336030 | gene fusion: IgH-MALT1 | female |
| GSM336019 | wild type | female |
| GSM336019 | wild type | female |
| GSM336019 | wild type | female |
| GSM336019 | wild type | female |
| GSM336035 | gene fusion: API2-MALT1 | female |
| GSM336018 | wild type | male |
| GSM336035 | gene fusion: API2-MALT1 | female |
| GSM336018 | wild type | male |
| GSM336039 | gene fusion: IgH-MALT1 | male |
| GSM336019 | wild type | female |
| GSM336018 | wild type | male |
| GSM336018 | wild type | male |
| GSM336039 | gene fusion: IgH-MALT1 | male |
| GSM336017 | gene fusion: API2-MALT1 | male |
| GSM336017 | gene fusion: API2-MALT1 | male |
| GSM336035 | gene fusion: API2-MALT1 | female |
| GSM336035 | gene fusion: API2-MALT1 | female |
| GSM336018 | wild type | male |
| GSM336017 | gene fusion: API2-MALT1 | male |
| GSM336019 | wild type | female |
| GSM336017 | gene fusion: API2-MALT1 | male |