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Home › Dataset Library › Transcription profiling by array of human breast cancer cell lines with or without HER2 amplification

Dataset: Transcription profiling by array of human breast cancer cell lines with or without HER2 amplification

Basal gene expression levels were determined by global gene expression profiling of breast cancer cell lines. Molecular subtype was...

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Basal gene expression levels were determined by global gene expression profiling of breast cancer cell lines. Molecular subtype was determined using gene expression and HER2 status assesses by HER2 FISH analysis. Experiment Overall Design: RNA was prepared from cell lines cultured in 10% fetal bovine serum

Species:
human

Samples:
51

Source:
E-GEOD-12777

PubMed:
19567590

Updated:
Dec.12, 2014

Registered:
Sep.10, 2014


Factors: (via ArrayExpress)
Sample cell line genotype cell type
GSE12777GSM320590 BT20 wild_type Basal
GSE12777GSM320591 KPL4 HER2 amplification Luminal
GSE12777GSM320592 MDA-MB-134VI wild_type Basal
GSE12777GSM320593 MX1 wild_type Basal
GSE12777GSM320594 HCC1806 wild_type Basal
GSE12777GSM320595 AU565 HER2 amplification Luminal
GSE12777GSM320596 BT474 HER2 amplification Luminal
GSE12777GSM320597 BT483 wild_type Luminal
GSE12777GSM320598 BT-549 wild_type Basal
GSE12777GSM320599 CAMA-1 wild_type Luminal
GSE12777GSM320600 DU4475 wild_type Basal
GSE12777GSM320601 Hs578T wild_type Basal
GSE12777GSM320602 MCF7 wild_type Luminal
GSE12777GSM320603 MDA-MB-175VII wild_type Luminal
GSE12777GSM320604 MDA-MB-231 wild_type Basal
GSE12777GSM320605 MDA-MB-361 HER2 amplification Luminal
GSE12777GSM320606 MDA-MB-415 wild_type Luminal
GSE12777GSM320607 MDA-MB-435s wild_type Basal
GSE12777GSM320608 MDA-MB-436 wild_type Basal
GSE12777GSM320609 MDA-MB-453 HER2 amplification Luminal
GSE12777GSM320610 MDA-MB-468 wild_type Basal
GSE12777GSM320611 SKBR3 HER2 amplification Luminal
GSE12777GSM320612 T47D wild_type Luminal
GSE12777GSM320613 UACC-812 HER2 amplification Luminal
GSE12777GSM320614 ZR75-1 wild_type Luminal
GSE12777GSM320615 CAL-120 wild_type Basal
GSE12777GSM320616 CAL-51 wild_type Basal
GSE12777GSM320617 CAL85-1 wild_type Basal
GSE12777GSM320618 EFM19 wild_type Luminal
GSE12777GSM320619 EFM-192A HER2 amplification Luminal
GSE12777GSM320620 EVSA-T wild_type Luminal
GSE12777GSM320621 HCC1937 wild_type Basal
GSE12777GSM320622 KPL1 wild_type Luminal
GSE12777GSM320623 HCC202 HER2 amplification Luminal
GSE12777GSM320624 HCC1419 HER2 amplification Luminal
GSE12777GSM320625 HCC70 wild_type Basal
GSE12777GSM320626 HCC1428 wild_type Luminal
GSE12777GSM320627 HCC1954 HER2 amplification Basal
GSE12777GSM320628 HCC2218 HER2 amplification Luminal
GSE12777GSM320629 HCC1500 wild_type Luminal
GSE12777GSM320630 HCC1395 wild_type Basal
GSE12777GSM320631 HCC1143 wild_type Basal
GSE12777GSM320632 HDQ-P1 wild_type Basal
GSE12777GSM320633 ZR75-30 HER2 amplification Luminal
GSE12777GSM320634 MFM-223 HER2 amplification Luminal
GSE12777GSM320635 HCC1569 HER2 amplification Basal
GSE12777GSM320636 HCC38 wild_type Basal
GSE12777GSM320637 CAL-148 wild_type Basal
GSE12777GSM320638 UACC-893 HER2 amplification Luminal
GSE12777GSM320639 JIMT-1 HER2 amplification Luminal
GSE12777GSM320640 SW527 wild_type Basal

Tags

  • basal
  • breast
  • breast cancer
  • cancer
  • cell
  • serum

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