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Home › Dataset Library › Laser capture microdissection of endothelial and neuronal cells from human dorsolateral prefrontal cortex

Dataset: Laser capture microdissection of endothelial and neuronal cells from human dorsolateral prefrontal cortex

We used laser capture microdissection to isolate both microvascular endothelial cells and neurons from post mortem brain tissue from...

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We used laser capture microdissection to isolate both microvascular endothelial cells and neurons from post mortem brain tissue from patients with schizophrenia and bipolar disorder and healthy controls. RNA was isolated from these cell populations, amplified, and analysed using Affymetrix HG133plus2.0 GeneChips. In the first instance, we used the dataset to compare the neuronal and endothelial data, in order to demonstrate that the predicted differences between cell types could be detected using this methodology. Keywords: cell type comparison, laser capture microdissection The dataset consists of endothelial cell samples from 18 individuals and neuronal samples from an overlapping population of 18 individuals.

Species:
human

Samples:
32

Source:
E-GEOD-12679

PubMed:
19088852

Updated:
Dec.12, 2014

Registered:
Sep.10, 2014


Factors: (via ArrayExpress)
Sample AGE DIAGNOSTIC GROUP PMI CELL TYPE SEX
GSM318410 45 schizophrenia 35h endothelial male
GSM3184 37 schizophrenia 30h endothelial male
GSM318412 45 schizophrenia 35h neuronal male
GSM318413 37 schizophrenia 30h neuronal male
GSM318414 42 schizophrenia 37h endothelial male
GSM318415 32 control 13h endothelial male
GSM318416 44 schizophrenia 9h endothelial male
GSM318417 54 schizophrenia 38h endothelial male
GSM318418 45 schizophrenia 18h endothelial male
GSM318419 44 control 10h endothelial female
GSM318420 19 schizophrenia 28h endothelial male
GSM31842 47 schizophrenia 35h endothelial female
GSM318422 54 schizophrenia 42h endothelial female
GSM318423 47 schizophrenia 30h endothelial female
GSM318424 42 schizophrenia 19h endothelial male
GSM318425 47 control 11h endothelial male
GSM318426 55 control 31h endothelial male
GSM318427 34 control 22h endothelial male
GSM318428 47 control 11h neuronal male
GSM318429 39 control 58h neuronal female
GSM318430 44 schizophrenia 26h neuronal female
GSM31843 41 bipolar disorder 28h neuronal female
GSM318432 48 bipolar disorder 23h neuronal male
GSM318433 46 control 31h neuronal male
GSM318434 35 bipolar disorder 35h neuronal male
GSM318435 51 bipolar disorder 23h neuronal male
GSM318436 32 control 13h neuronal male
GSM318437 42 bipolar disorder 32h neuronal male
GSM318438 52 schizophrenia 16h neuronal male
GSM318439 47 schizophrenia 35h neuronal female
GSM318440 34 control 22h neuronal male
GSM31844 49 control 45h neuronal female

Tags

  • bipolar disorder
  • brain
  • cell
  • endothelial cell
  • schizophrenia

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