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Home › Dataset Library › Laser capture microdissection of endothelial and neuronal cells from human dorsolateral prefrontal cortex

Dataset: Laser capture microdissection of endothelial and neuronal cells from human dorsolateral prefrontal cortex

We used laser capture microdissection to isolate both microvascular endothelial cells and neurons from post mortem brain tissue from...

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We used laser capture microdissection to isolate both microvascular endothelial cells and neurons from post mortem brain tissue from patients with schizophrenia and bipolar disorder and healthy controls. RNA was isolated from these cell populations, amplified, and analysed using Affymetrix HG133plus2.0 GeneChips. In the first instance, we used the dataset to compare the neuronal and endothelial data, in order to demonstrate that the predicted differences between cell types could be detected using this methodology. Keywords: cell type comparison, laser capture microdissection The dataset consists of endothelial cell samples from 18 individuals and neuronal samples from an overlapping population of 18 individuals.

Species:
human

Samples:
32

Source:
E-GEOD-12679

PubMed:
19088852

Updated:
Dec.12, 2014

Registered:
Sep.10, 2014


Factors: (via ArrayExpress)
Sample AGE SEX DIAGNOSTIC GROUP PMI CELL TYPE
GSM318410 45 male schizophrenia 35h endothelial
GSM3184 37 male schizophrenia 30h endothelial
GSM318412 45 male schizophrenia 35h neuronal
GSM318413 37 male schizophrenia 30h neuronal
GSM318414 42 male schizophrenia 37h endothelial
GSM318415 32 male control 13h endothelial
GSM318416 44 male schizophrenia 9h endothelial
GSM318417 54 male schizophrenia 38h endothelial
GSM318418 45 male schizophrenia 18h endothelial
GSM318419 44 female control 10h endothelial
GSM318420 19 male schizophrenia 28h endothelial
GSM31842 47 female schizophrenia 35h endothelial
GSM318422 54 female schizophrenia 42h endothelial
GSM318423 47 female schizophrenia 30h endothelial
GSM318424 42 male schizophrenia 19h endothelial
GSM318425 47 male control 11h endothelial
GSM318426 55 male control 31h endothelial
GSM318427 34 male control 22h endothelial
GSM318428 47 male control 11h neuronal
GSM318429 39 female control 58h neuronal
GSM318430 44 female schizophrenia 26h neuronal
GSM31843 41 female bipolar disorder 28h neuronal
GSM318432 48 male bipolar disorder 23h neuronal
GSM318433 46 male control 31h neuronal
GSM318434 35 male bipolar disorder 35h neuronal
GSM318435 51 male bipolar disorder 23h neuronal
GSM318436 32 male control 13h neuronal
GSM318437 42 male bipolar disorder 32h neuronal
GSM318438 52 male schizophrenia 16h neuronal
GSM318439 47 female schizophrenia 35h neuronal
GSM318440 34 male control 22h neuronal
GSM31844 49 female control 45h neuronal

Tags

  • bipolar disorder
  • brain
  • cell
  • endothelial cell
  • schizophrenia

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