Dataset: Transcription profiling by array of human LMP1 transfected CD10-positive germinal center B cells
In this study, we have investigated the effect of LMP1 on gene expression in normal human GC B cells using a non-viral vector based...
In this study, we have investigated the effect of LMP1 on gene expression in normal human GC B cells using a non-viral vector based system Experiment Overall Design: Gene expression was compared between LMP1-transfected and control vector-transfected GC B cells from three patients. RNA from the FACS-sorted transfected GC B cells was amplified. 10ug of fragmented cRNA was hybridized to HG-U133 Plus 2.0 microarrays. Differentially expressed genes were identified using significance analysis of microarrays (SAM) with a 1.5 fold change threshold and the q-value threshold set to 5%.
- Species:
- human
- Samples:
- 6
- Source:
- E-GEOD-10821
- PubMed:
- 18566961
- Updated:
- Dec.12, 2014
- Registered:
- Aug.12, 2014
Factors:
(via ArrayExpress)
Sample | genotype |
---|---|
GSE10821GSM273009 | LMP1 |
GSE10821GSM273009 | LMP1 |
GSE10821GSM273009 | LMP1 |
GSE10821GSM272994 | empty vector |
GSE10821GSM272994 | empty vector |
GSE10821GSM272994 | empty vector |